RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SNF8Q96H20 258 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 TIMM29Q9BSF4 260 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 RAB17Q9H0T7 212 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 DPEP2Q9H4A9 486 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 L2HGDHQ9H9P8 463 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 SYBUQ9NX95 663 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 TAAR2Q9P1P5 351 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 UTP11Q9Y3A2 253 aaKnown RBP10.88□□□□□ -0.67
CHD3-216ENST00000573936 TP53BP1Q12888 1972 aaPredicted RBP10.88□□□□□ -0.67
CHD3-216ENST00000573936 COL5A1P20908 1838 aaPredicted RBP10.87□□□□□ -0.67
CHD3-216ENST00000573936 GOLGA4Q13439 2230 aaKnown RBP10.87□□□□□ -0.67
CHD3-216ENST00000573936 CCDC162PA2VCL2 907 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 EME2A4GXA9 379 aaPredicted RBP10.87□□□□□ -0.67
CHD3-216ENST00000573936 QSOX1O00391 747 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 CCL22O00626 93 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 PFDN6O15212 129 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 AVILO75366 819 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 RFPL3O75679 317 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 GOT2P00505 430 aaKnown RBP10.87□□□□□ -0.67
CHD3-216ENST00000573936 GP1BAP07359 652 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 ATP1B2P14415 290 aaPredicted RBP10.87□□□□□ -0.67
CHD3-216ENST00000573936 IVDP26440 423 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 AK4P27144 223 aaPredicted RBP10.87□□□□□ -0.67
CHD3-216ENST00000573936 FOXN2P32314 431 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 MAGEA3P43357 314 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 ARSDP51689 593 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 CRADDP78560 199 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 E2F1Q01094 437 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 CALCOCO2Q13137 446 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 ITIH4Q14624 930 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 TCEA2Q15560 299 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 KCTD19Q17RG1 926 aaPredicted RBP10.87□□□□□ -0.67
CHD3-216ENST00000573936 INSCQ1MX18 579 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 AARS2Q5JTZ9 985 aaKnown RBP10.87□□□□□ -0.67
CHD3-216ENST00000573936 HIBCHQ6NVY1 386 aaPredicted RBP10.87□□□□□ -0.67
CHD3-216ENST00000573936 SLC30A9Q6PML9 568 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 TRAPPC5Q8IUR0 188 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 RASGEF1AQ8N9B8 481 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 GPR156Q8NFN8 814 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 MDM1Q8TC05 714 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 ZDHHC1Q8WTX9 485 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 NAT6Q93015 286 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 ZNF778Q96MU6 729 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 ERP44Q9BS26 406 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 TRIM51Q9BSJ1 452 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 NAT9Q9BTE0 207 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 FAM96AQ9H5X1 160 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 CAAP1Q9H8G2 361 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 TREX1Q9NSU2 369 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 GULP1Q9UBP9 304 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 SLC2A6Q9UGQ3 507 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 PADI4Q9UM07 663 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 PRKAB1Q9Y478 270 aa10.87□□□□□ -0.67
CHD3-216ENST00000573936 SCN8AQ9UQD0 1980 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 IGLV3-16A0A075B6K0 115 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 FAM237BA0A1B0GVD1 139 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 OR5K4A6NMS3 321 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 B4DGG1 531 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 GPR39O43194 453 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 ZW10O43264 779 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 RAD51CO43502 376 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 KALRNO60229 2985 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 USP1O94782 785 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 AP2A2O94973 939 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 SEC31AO94979 1220 aaKnown RBP10.86□□□□□ -0.67
CHD3-216ENST00000573936 CAPNS1P04632 268 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 GSTM1P09488 218 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 ACP5P13686 325 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 NMBRP28336 390 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 CA5AP35218 305 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 NSG1P42857 185 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 ACADVLP49748 655 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 ITGA8P53708 1063 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 ARL4CP56559 192 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 GSTM4Q03013 218 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 DNAJC3Q13217 504 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 BCL7AQ4VC05 210 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 KHDC1Q4VXA5 237 aaKnown RBP10.86□□□□□ -0.67
CHD3-216ENST00000573936 KIAA0930Q6ICG6 404 aaPredicted RBP10.86□□□□□ -0.67
CHD3-216ENST00000573936 MRNIPQ6NTE8 343 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 CRTC3Q6UUV7 619 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 PACS1Q6VY07 963 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 SDCCAG8Q86SQ7 713 aaPredicted RBP10.86□□□□□ -0.67
CHD3-216ENST00000573936 SLCO6A1Q86UG4 719 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 AMZ2Q86W34 360 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 CCNJLQ8IV13 435 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 SLC35F3Q8IY50 421 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 PDIK1LQ8N165 341 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 MPP5Q8N3R9 675 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 CEP112Q8N8E3 955 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 AVL9Q8NBF6 648 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 GABPB2Q8TAK5 448 aaPredicted RBP10.86□□□□□ -0.67
CHD3-216ENST00000573936 IFI44Q8TCB0 444 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 LRRC39Q96DD0 335 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 SIGLEC10Q96LC7 697 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 LINC00615Q96LM1 132 aaPredicted RBP10.86□□□□□ -0.67
CHD3-216ENST00000573936 TRIM31Q9BZY9 425 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 VPS37BQ9H9H4 285 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 KLC4Q9NSK0 619 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 CATSPERZQ9NTU4 200 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms