RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 B4E171 279 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 KCNN4O15554 427 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 PPFIA2O75334 1257 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 ANXA9O76027 345 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 SLC2A4P14672 509 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 TSPAN7P41732 249 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 XIAPP98170 497 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 RHDQ02161 417 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 DMPKQ09013 629 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 GPRC6AQ5T6X5 926 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 KCTD11Q693B1 232 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 ITPRIPL1Q6GPH6 555 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 TMEM26Q6ZUK4 368 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 SH3KBP1Q96B97 665 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 WBP1Q96G27 269 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 HES6Q96HZ4 224 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 TAAR9Q96RI9 348 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 APOL2Q9BQE5 337 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 ARNT2Q9HBZ2 717 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 IMPACTQ9P2X3 320 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 DNAJC16Q9Y2G8 782 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 WDR37Q9Y2I8 494 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 B3GALT1Q9Y5Z6 326 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 CAPN6Q9Y6Q1 641 aa17.14■□□□□ 0.33
SMG6-214ENST00000573827 SETXQ7Z333 2677 aaKnown RBP17.13■□□□□ 0.33
SMG6-214ENST00000573827 MACROD2A1Z1Q3 448 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 C5orf60A6NFR6 353 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 SGTAO43765 313 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 TJP3O95049 919 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 FTCDO95954 541 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 CD82P27701 267 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 NAP1L1P55209 391 aaKnown RBP17.13■□□□□ 0.33
SMG6-214ENST00000573827 CLCA4Q14CN2 919 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 TAF1AQ15573 450 aaPredicted RBP17.13■□□□□ 0.33
SMG6-214ENST00000573827 INSCQ1MX18 579 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 CCDC181Q5TID7 509 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 KIAA1614Q5VZ46 1190 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 CCDC81Q6ZN84 652 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 FAM83HQ6ZRV2 1179 aaPredicted RBP17.13■□□□□ 0.33
SMG6-214ENST00000573827 SLC35B2Q8TB61 432 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 DDA1Q9BW61 102 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 FSD1LQ9BXM9 530 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 OSGEPL1Q9H4B0 414 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 EPB41L1Q9H4G0 881 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.13■□□□□ 0.33
SMG6-214ENST00000573827 AMFRQ9UKV5 643 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 MYO18BQ8IUG5 2567 aa17.13■□□□□ 0.33
SMG6-214ENST00000573827 OR52A4PA6NMU1 304 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 C9P02748 559 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 RPL10P27635 214 aaKnown RBP17.12■□□□□ 0.33
SMG6-214ENST00000573827 ZNF140P52738 457 aaPredicted RBP17.12■□□□□ 0.33
SMG6-214ENST00000573827 GFERP55789 205 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 LDLRAP1Q5SW96 308 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 DARS2Q6PI48 645 aaKnown RBP17.12■□□□□ 0.33
SMG6-214ENST00000573827 MICALCLQ6ZW33 695 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 PEX26Q7Z412 305 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 KIAA1328Q86T90 577 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 VASH2Q86V25 355 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 AVL9Q8NBF6 648 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 OR4K2Q8NGD2 314 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 BRSK1Q8TDC3 778 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 ART4Q93070 314 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.12■□□□□ 0.33
SMG6-214ENST00000573827 SEMA4CQ9C0C4 833 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 SLC40A1Q9NP59 571 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 SIDT1Q9NXL6 827 aaKnown RBP17.12■□□□□ 0.33
SMG6-214ENST00000573827 AKAP7Q9P0M2 348 aaPredicted RBP17.12■□□□□ 0.33
SMG6-214ENST00000573827 FKBPLQ9UIM3 349 aa17.12■□□□□ 0.33
SMG6-214ENST00000573827 AAR2Q9Y312 384 aaKnown RBP17.12■□□□□ 0.33
SMG6-214ENST00000573827 MIF4GDA9UHW6 222 aaKnown RBP17.11■□□□□ 0.33
SMG6-214ENST00000573827 STX7O15400 261 aaKnown RBP17.11■□□□□ 0.33
SMG6-214ENST00000573827 POP7O75817 140 aaKnown RBP17.11■□□□□ 0.33
SMG6-214ENST00000573827 PRAMEF1O95521 474 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 METTL18O95568 372 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 ANKRD34CP0C6C1 535 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 LPOP22079 712 aaPredicted RBP17.11■□□□□ 0.33
SMG6-214ENST00000573827 CSTF2P33240 577 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMG6-214ENST00000573827 DRG2P55039 364 aaKnown RBP17.11■□□□□ 0.33
SMG6-214ENST00000573827 GDF10P55107 478 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 KIF5AQ12840 1032 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 SEPT7Q16181 437 aaKnown RBP17.11■□□□□ 0.33
SMG6-214ENST00000573827 TRAPPC5Q8IUR0 188 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 ZNF843Q8N446 348 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 SPC24Q8NBT2 197 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 OR13C4Q8NGS5 318 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 ZNF398Q8TD17 642 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 NAT14Q8WUY8 206 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 NCSTNQ92542 709 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 AHCYL2Q96HN2 611 aaKnown RBP17.11■□□□□ 0.33
SMG6-214ENST00000573827 C19orf43Q9BQ61 176 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 STN1Q9H668 368 aaKnown RBP17.11■□□□□ 0.33
SMG6-214ENST00000573827 POT1Q9NUX5 634 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.11■□□□□ 0.33
SMG6-214ENST00000573827 PKP3Q9Y446 797 aa17.11■□□□□ 0.33
SMG6-214ENST00000573827 ASH1LQ9NR48 2969 aaKnown RBP17.1■□□□□ 0.33
SMG6-214ENST00000573827 EFCAB7A8K855 629 aa17.1■□□□□ 0.33
SMG6-214ENST00000573827 PDZK1P1A8MUH7 402 aa17.1■□□□□ 0.33
SMG6-214ENST00000573827 LDB2O43679 373 aa17.1■□□□□ 0.33
SMG6-214ENST00000573827 KCNJ13O60928 360 aa17.1■□□□□ 0.33
SMG6-214ENST00000573827 IDSP22304 550 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms