RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SQSTM1Q13501 440 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 SPARCL1Q14515 664 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 MANEAQ5SRI9 462 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 LDLRAP1Q5SW96 308 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 GPRC6AQ5T6X5 926 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 KIAA1614Q5VZ46 1190 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 INO80CQ6PI98 192 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 WDR74Q6RFH5 385 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 ARHGEF18Q6ZSZ5 1173 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 DET1Q7L5Y6 550 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 RNF10Q8N5U6 811 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 OR4K2Q8NGD2 314 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 ART4Q93070 314 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 PMEPA1Q969W9 287 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 CXorf40BQ96DE9 158 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 HES6Q96HZ4 224 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 SPATA13Q96N96 652 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 TBL1YQ9BQ87 522 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 TSGA10Q9BZW7 698 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 LZTFL1Q9NQ48 299 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 OCIAD1Q9NX40 245 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 SLC39A1Q9NY26 324 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 ACSL6Q9UKU0 697 aa12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 R3HDM2Q9Y2K5 976 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-213ENST00000573519 SCN8AQ9UQD0 1980 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 OR52A4PA6NMU1 304 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 ERVH48-1M5A8F1 160 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 KRT86O43790 486 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 PPFIA2O75334 1257 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 CRTAMO95727 393 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 TYRP1P17643 537 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 AMD1P17707 334 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 XRCC1P18887 633 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 MSH3P20585 1137 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 CD82P27701 267 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 CA5AP35218 305 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 ADRA1AP35348 466 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 SLC19A1P41440 591 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 HALP42357 657 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 UBE2IP63279 158 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 CCZ1BP86790 482 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 CCZ1P86791 482 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 TMPRSS15P98073 1019 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 TAF1AQ15573 450 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 TMEM220Q6QAJ8 160 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 RANBP10Q6VN20 620 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 VASH2Q86V25 355 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 AMZ2Q86W34 360 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 TAB3Q8N5C8 712 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 RASGEF1AQ8N9B8 481 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 FAM71DQ8N9W8 422 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 TTC13Q8NBP0 860 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 DDHD1Q8NEL9 900 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 ZNF398Q8TD17 642 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 PPP1R2P1Q96PQ5 205 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 ASB8Q9H765 288 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 GRPEL1Q9HAV7 217 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 ZNF624Q9P2J8 865 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 FKBPLQ9UIM3 349 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 SSUH2Q9Y2M2 353 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 KCTD3Q9Y597 815 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 KIF26BQ2KJY2 2108 aa12.49□□□□□ -0.41
NPLOC4-213ENST00000573519 IGSF10Q6WRI0 2623 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 C5orf60A6NFR6 353 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 LILRA5A6NI73 299 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 STMND1H3BQB6 276 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 GAPDHSO14556 408 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 POP7O75817 140 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 ZNF189O75820 626 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 UBXN7O94888 489 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 BRAFP15056 766 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 CTSCP53634 463 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 LONRF2Q1L5Z9 754 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 FNBP1LQ5T0N5 605 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 DCAF12Q5T6F0 453 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 ANKS6Q68DC2 871 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 TMEM26Q6ZUK4 368 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 C11orf96Q7Z7L8 435 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 PLXDC1Q8IUK5 500 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 BEND7Q8N7W2 519 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 OR13C4Q8NGS5 318 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 DTX3LQ8TDB6 740 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 NAT14Q8WUY8 206 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 CTRCQ99895 268 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 EPB41L1Q9H4G0 881 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 POT1Q9NUX5 634 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 FAM8A1Q9UBU6 413 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 CRLS1Q9UJA2 301 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 PSMD13Q9UNM6 376 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 WDR37Q9Y2I8 494 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 B3GALT1Q9Y5Z6 326 aa12.48□□□□□ -0.41
NPLOC4-213ENST00000573519 ARHGEF17Q96PE2 2063 aaPredicted RBP12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 LOC400499M0QZD8 3231 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 GOLGA6L3A6NEY3 463 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 B4E171 279 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 TK2O00142 265 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 CCL22O00626 93 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 EFSO43281 561 aa12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 SRP72O76094 671 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-213ENST00000573519 CCDC175P0C221 793 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms