RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 CLDN6P56747 220 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 B4GALNT1Q00973 533 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 ACVR1Q04771 509 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 CACNG1Q06432 222 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 LAMB3Q13751 1172 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 DHX34Q14147 1143 aaKnown RBP15.58■□□□□ 0.08
CHD3-215ENST00000572750 CASC4Q6P4E1 433 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 AFTPHQ6ULP2 937 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 CES3Q6UWW8 571 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 DHRS13Q6UX07 377 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 NLRP9Q7RTR0 991 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 TAS2R42Q7RTR8 314 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 EFL1Q7Z2Z2 1120 aaKnown RBP15.58■□□□□ 0.08
CHD3-215ENST00000572750 SERPINA9Q86WD7 417 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 BEND7Q8N7W2 519 aaPredicted RBP15.58■□□□□ 0.08
CHD3-215ENST00000572750 MCUQ8NE86 351 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 IFI44Q8TCB0 444 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 ZDHHC1Q8WTX9 485 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 GLMNQ92990 594 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 TRIM56Q9BRZ2 755 aaKnown RBP15.58■□□□□ 0.08
CHD3-215ENST00000572750 TRIM31Q9BZY9 425 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 OSGEPL1Q9H4B0 414 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 XAB2Q9HCS7 855 aaKnown RBP15.58■□□□□ 0.08
CHD3-215ENST00000572750 TREX1Q9NSU2 369 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 NCKIPSDQ9NZQ3 722 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 SLC23A2Q9UGH3 650 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 RIMKLBQ9ULI2 386 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 DNAJC16Q9Y2G8 782 aa15.58■□□□□ 0.08
CHD3-215ENST00000572750 COL27A1Q8IZC6 1860 aaPredicted RBP15.57■□□□□ 0.08
CHD3-215ENST00000572750 FAM221BA6H8Z2 402 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 KMOO15229 486 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 SNX2O60749 519 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 MLNP12872 115 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 IVDP26440 423 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 PBLDP30039 288 aaPredicted RBP15.57■□□□□ 0.08
CHD3-215ENST00000572750 MAGEA3P43357 314 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 RPIAP49247 311 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 PRAMEP78395 509 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 DBN1Q16643 649 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 GPR33Q49SQ1 333 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 C14orf28Q4W4Y0 310 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 PERM1Q5SV97 790 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 FNBP1LQ5T0N5 605 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 C11orf96Q7Z7L8 435 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 AGGF1Q8N302 714 aaeCLIP15.57■□□□□ 0.08
CHD3-215ENST00000572750 GPR156Q8NFN8 814 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 OR6P1Q8NGX9 317 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 PEX13Q92968 403 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 SGF29Q96ES7 293 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 DCUN1D1Q96GG9 259 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 COPS8Q99627 209 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 KIFC1Q9BW19 673 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 KLC4Q9NSK0 619 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 EVA1BQ9NVM1 165 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 ZDHHC3Q9NYG2 299 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 TBC1D29Q9UFV1 150 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 CDC23Q9UJX2 597 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 PADI4Q9UM07 663 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 SOX13Q9UN79 622 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 PCDHGA1Q9Y5H4 931 aa15.57■□□□□ 0.08
CHD3-215ENST00000572750 IGLV3-16A0A075B6K0 115 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 CASC3O15234 703 aaKnown RBP15.56■□□□□ 0.08
CHD3-215ENST00000572750 RAD51CO43502 376 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 BANF1O75531 89 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 PRB1P04280 392 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 ZNF7P17097 686 aaPredicted RBP15.56■□□□□ 0.08
CHD3-215ENST00000572750 DUSP3P51452 185 aaPredicted RBP15.56■□□□□ 0.08
CHD3-215ENST00000572750 CKAP4Q07065 602 aaKnown RBP15.56■□□□□ 0.08
CHD3-215ENST00000572750 HLTFQ14527 1009 aaKnown RBP eCLIP15.56■□□□□ 0.08
CHD3-215ENST00000572750 SEPT7Q16181 437 aaKnown RBP15.56■□□□□ 0.08
CHD3-215ENST00000572750 TMEM220Q6QAJ8 160 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 ZNF572Q7Z3I7 529 aaPredicted RBP15.56■□□□□ 0.08
CHD3-215ENST00000572750 RAB44Q7Z6P3 723 aaPredicted RBP15.56■□□□□ 0.08
CHD3-215ENST00000572750 HOOK3Q86VS8 718 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 NAGSQ8N159 534 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 CHCHD4Q8N4Q1 142 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 ADAMTS14Q8WXS8 1223 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 CCDC74AQ96AQ1 378 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 MFSD3Q96ES6 412 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 SNF8Q96H20 258 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 TIMM29Q9BSF4 260 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 MRM3Q9HC36 420 aaKnown RBP15.56■□□□□ 0.08
CHD3-215ENST00000572750 SAMD15Q9P1V8 674 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 FAM8A1Q9UBU6 413 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 RP1P56715 2156 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 ASXL3Q9C0F0 2248 aa15.56■□□□□ 0.08
CHD3-215ENST00000572750 PIKFYVEQ9Y2I7 2098 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 EME2A4GXA9 379 aaPredicted RBP15.55■□□□□ 0.08
CHD3-215ENST00000572750 CFAP99D6REC4 459 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 KIF2AO00139 706 aaPredicted RBP15.55■□□□□ 0.08
CHD3-215ENST00000572750 SGTAO43765 313 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 SEC31AO94979 1220 aaKnown RBP15.55■□□□□ 0.08
CHD3-215ENST00000572750 RALBP11234 206 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 ARNTP27540 789 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 RPL21P46778 160 aaKnown RBP15.55■□□□□ 0.08
CHD3-215ENST00000572750 ILKQ13418 452 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 SEMA3AQ14563 771 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 MORF4L2Q15014 288 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 OGFOD3Q6PK18 319 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 PCGF5Q86SE9 256 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms