RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 EPN3Q9H201 632 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 ADNPQ9H2P0 1102 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 WDR26Q9H7D7 661 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 ARFGAP3Q9NP61 516 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 GPR27Q9NS67 375 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 KCTD5Q9NXV2 234 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 BFARQ9NZS9 450 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 IL17CQ9P0M4 197 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 KLF15Q9UIH9 416 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 LOXL2Q9Y4K0 774 aa13.17□□□□□ -0.3
CCDC40-205ENST00000571028 FAM187AA6NFU0 413 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 D6RAR5 112 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 LMO7DNF2Z398 122 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 NTN3O00634 580 aaPredicted RBP13.16□□□□□ -0.3
CCDC40-205ENST00000571028 ASMTLO95671 621 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 TSHRP16473 764 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 HTR1BP28222 390 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 HMGCLP35914 325 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 SPAM1P38567 509 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 ITGA8P53708 1063 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 MSLNQ13421 630 aaPredicted RBP13.16□□□□□ -0.3
CCDC40-205ENST00000571028 CLCA4Q14CN2 919 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 CHRNA6Q15825 494 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 SKIDA1Q1XH10 827 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 ZNF648Q5T619 568 aaPredicted RBP13.16□□□□□ -0.3
CCDC40-205ENST00000571028 RNASEH2BQ5TBB1 312 aaKnown RBP13.16□□□□□ -0.3
CCDC40-205ENST00000571028 C8orf74Q6P047 294 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 CASC4Q6P4E1 433 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 LRRC8BQ6P9F7 803 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 PHACTR4Q8IZ21 702 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 RBFAQ8N0V3 343 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 FAM26EQ8N5C1 309 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 PPHLN1Q8NEY8 458 aaKnown RBP13.16□□□□□ -0.3
CCDC40-205ENST00000571028 GDAP1Q8TB36 358 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 FUBP1Q96AE4 644 aaKnown RBP13.16□□□□□ -0.3
CCDC40-205ENST00000571028 LRRC1Q9BTT6 524 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 FAM96AQ9H5X1 160 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 LRRC4CQ9HCJ2 640 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 IL26Q9NPH9 171 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 PHPT1Q9NRX4 125 aaPredicted RBP13.16□□□□□ -0.3
CCDC40-205ENST00000571028 RAD18Q9NS91 495 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 SIRPGQ9P1W8 387 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 ANAPC5Q9UJX4 755 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 MAN2B2Q9Y2E5 1009 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 TMEM98Q9Y2Y6 226 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 DOPEY2Q9Y3R5 2298 aa13.16□□□□□ -0.3
CCDC40-205ENST00000571028 FLNCQ14315 2725 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 GLYATL1P3A0A0U1RQE8 302 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 RGSL1A5PLK6 1076 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 ENO4A6NNW6 628 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 FADS2P1A8MWK0 482 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 AGRPO00253 132 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 CASC3O15234 703 aaKnown RBP13.15□□□□□ -0.3
CCDC40-205ENST00000571028 GPR39O43194 453 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 LDB2O43679 373 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 UGT1A9O60656 530 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 RPLP0P05388 317 aaKnown RBP13.15□□□□□ -0.3
CCDC40-205ENST00000571028 UGT1A6P19224 532 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 UGT1A1P22309 533 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 UGT1A4P22310 534 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 ADRA1DP25100 572 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 UGT1A3P35503 534 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 NPY2RP49146 381 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 ZNF140P52738 457 aaPredicted RBP13.15□□□□□ -0.3
CCDC40-205ENST00000571028 YPEL5P62699 121 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 FOXK1P85037 733 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 CDK16Q00536 496 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 PDE1BQ01064 536 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 KCNAB2Q13303 367 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 NFATC4Q14934 902 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 IGFBP7Q16270 282 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 HENMT1Q5T8I9 393 aaKnown RBP13.15□□□□□ -0.3
CCDC40-205ENST00000571028 BORAQ6PGQ7 559 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 CES3Q6UWW8 571 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 ZNF534Q76KX8 674 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 MARK2Q7KZI7 788 aaKnown RBP13.15□□□□□ -0.3
CCDC40-205ENST00000571028 ZNF765Q7L2R6 523 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 ZNF572Q7Z3I7 529 aaPredicted RBP13.15□□□□□ -0.3
CCDC40-205ENST00000571028 PCGF5Q86SE9 256 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 HID1Q8IV36 788 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 MPP5Q8N3R9 675 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 SDR16C5Q8N3Y7 309 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 CEP112Q8N8E3 955 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 ARL10Q8N8L6 244 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 NAT8LQ8N9F0 302 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 TSACCQ96A04 125 aaPredicted RBP13.15□□□□□ -0.3
CCDC40-205ENST00000571028 CCDC74AQ96AQ1 378 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 SNF8Q96H20 258 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 PWWP2AQ96N64 755 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 LRRC61Q9BV99 259 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 UGT1A7Q9HAW7 530 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 UGT1A10Q9HAW8 530 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 UGT1A8Q9HAW9 530 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 MRPL40Q9NQ50 206 aaKnown RBP13.15□□□□□ -0.3
CCDC40-205ENST00000571028 CHRAC1Q9NRG0 131 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 SYBUQ9NX95 663 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 SLC2A6Q9UGQ3 507 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 MAD1L1Q9Y6D9 718 aa13.15□□□□□ -0.3
CCDC40-205ENST00000571028 MYO9AB2RTY4 2548 aa13.14□□□□□ -0.31
CCDC40-205ENST00000571028 LRRK1Q38SD2 2015 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms