RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 TMEM236Q5W0B7 351 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 IL31Q6EBC2 164 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 TUBA3EQ6PEY2 450 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 ARHGAP36Q6ZRI8 547 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 KDELC2Q7Z4H8 507 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 PIM3Q86V86 326 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 YIPF6Q96EC8 236 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 NSUN5Q96P11 429 aaKnown RBP15.26■□□□□ 0.03
SMG6-207ENST00000570756 ZNF300Q96RE9 604 aaPredicted RBP15.26■□□□□ 0.03
SMG6-207ENST00000570756 NMRK2Q9NPI5 230 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 CNGB3Q9NQW8 809 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 UGT2A1Q9Y4X1 527 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 TPD52L2O43399 206 aaKnown RBP15.26■□□□□ 0.03
SMG6-207ENST00000570756 MAP3K7CLP57077 242 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 IFITM2Q01629 132 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 PRKG2Q13237 762 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 LRIT3Q3SXY7 679 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 SV2CQ496J9 727 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 LAIR2Q6ISS4 152 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 SLC27A1Q6PCB7 646 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 PAGE2Q7Z2X7 111 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 RALGPS2Q86X27 583 aaPredicted RBP15.26■□□□□ 0.03
SMG6-207ENST00000570756 PLD3Q8IV08 490 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 OR6P1Q8NGX9 317 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 MCOLN3Q8TDD5 553 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 GIPC2Q8TF65 315 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 HTRA1Q92743 480 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 TMEM209Q96SK2 561 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 EPS8L2Q9H6S3 715 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 RRAGCQ9HB90 399 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 TPRKBQ9Y3C4 175 aa15.26■□□□□ 0.03
SMG6-207ENST00000570756 ANKRD34BA5PLL1 514 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 H0Y626 953 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 NDUFB5O43674 189 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 HS6ST1O60243 411 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 TRIM16O95361 564 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 DLGAP3O95886 979 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 HLA-DQB2P05538 268 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 BMP1P13497 986 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 WARSP23381 471 aaKnown RBP15.25■□□□□ 0.03
SMG6-207ENST00000570756 ALDH4A1P30038 563 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 SERPINH1P50454 418 aaKnown RBP15.25■□□□□ 0.03
SMG6-207ENST00000570756 ERVK-8P63133 956 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 SLC13A2Q13183 592 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 KIAA0319Q5VV43 1072 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 TIGD7Q6NT04 549 aaPredicted RBP15.25■□□□□ 0.03
SMG6-207ENST00000570756 LRRC49Q8IUZ0 686 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 LYSMD2Q8IV50 215 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 EID3Q8N140 333 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 SETD9Q8NE22 299 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 LILRB4Q8NHJ6 448 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 COPS5Q92905 334 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 CCDC115Q96NT0 180 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 TRIT1Q9H3H1 467 aaKnown RBP15.25■□□□□ 0.03
SMG6-207ENST00000570756 MFSD1Q9H3U5 465 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 LTB4R2Q9NPC1 389 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 ABCB10Q9NRK6 738 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 RBM22Q9NW64 420 aaKnown RBP eCLIP15.25■□□□□ 0.03
SMG6-207ENST00000570756 SMPD4Q9NXE4 827 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 MIA3Q5JRA6 1907 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 LRRC14BA6NHZ5 514 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 ZBBXA8MT70 800 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 MAFKO60675 156 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 ANGPTL1O95841 491 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 S1PR4O95977 384 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 PTTG1O95997 202 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 SLC4A1P02730 911 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 TXNP10599 105 aaKnown RBP15.25■□□□□ 0.03
SMG6-207ENST00000570756 FDXRP22570 491 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 ACVR2AP27037 513 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 WNT3AP56704 352 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 ARPC4P59998 168 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 DMPKQ09013 629 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 SPESP1Q6UW49 350 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 LIMS2Q7Z4I7 341 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 RNF34Q969K3 372 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 ZNF419Q96HQ0 510 aaPredicted RBP15.25■□□□□ 0.03
SMG6-207ENST00000570756 REXO5Q96IC2 774 aaKnown RBP15.25■□□□□ 0.03
SMG6-207ENST00000570756 SLIRPQ9GZT3 109 aaKnown RBP15.25■□□□□ 0.03
SMG6-207ENST00000570756 FAM49AQ9H0Q0 323 aaPredicted RBP15.25■□□□□ 0.03
SMG6-207ENST00000570756 TFB2MQ9H5Q4 396 aaKnown RBP15.25■□□□□ 0.03
SMG6-207ENST00000570756 GORASP2Q9H8Y8 452 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 ARNT2Q9HBZ2 717 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 ADARB2Q9NS39 739 aaKnown RBP15.25■□□□□ 0.03
SMG6-207ENST00000570756 CEP350Q5VT06 3117 aa15.25■□□□□ 0.03
SMG6-207ENST00000570756 ADM5C9JUS6 153 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 TAF4O00268 1085 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 BCKDKO14874 412 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 GSTA4O15217 222 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 SLC16A6O15403 523 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 MTHFD2P13995 350 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 IL5RAQ01344 420 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 YWHAHQ04917 246 aaPredicted RBP15.24■□□□□ 0.03
SMG6-207ENST00000570756 CDK5R2Q13319 367 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 KRR1Q13601 381 aaKnown RBP15.24■□□□□ 0.03
SMG6-207ENST00000570756 PCSK7Q16549 785 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 SYT6Q5T7P8 510 aaPredicted RBP15.24■□□□□ 0.03
SMG6-207ENST00000570756 ANKS6Q68DC2 871 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 PAQR9Q6ZVX9 377 aa15.24■□□□□ 0.03
SMG6-207ENST00000570756 ZFAND4Q86XD8 727 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms