RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 TRIT1Q9H3H1 467 aaKnown RBP8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 EPB41L1Q9H4G0 881 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 UGT1A7Q9HAW7 530 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 UGT1A10Q9HAW8 530 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 UGT1A8Q9HAW9 530 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 GLOD4Q9HC38 313 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 FAM8A1Q9UBU6 413 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 TUBD1Q9UJT1 453 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 TP53TG5Q9Y2B4 290 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 BSNQ9UPA5 3926 aa8.46□□□□□ -1.06
CTDNEP1-203ENST00000570385 COL12A1Q99715 3063 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 SEC16AO15027 2179 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 A0A0A6YYK5 440 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 PIPSLA2A3N6 862 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 PPP1R12AO14974 1030 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 DDX3YO15523 660 aaKnown RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 MTSS1O43312 755 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 VEGFDO43915 354 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 SPAG6O75602 509 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 POP7O75817 140 aaKnown RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 DNAJB5O75953 348 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 TMEM253P0C7T8 217 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 PECAM1P16284 738 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 PTPN3P26045 913 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 PBLDP30039 288 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 CD68P34810 354 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 CTSCP53634 463 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 MLLT10P55197 1068 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 FOXK1P85037 733 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 MC1RQ01726 317 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 TMEM115Q12893 351 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 GTF2H3Q13889 308 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 SEPT6Q14141 434 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 PTPRCAPQ14761 206 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 CHRNA6Q15825 494 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 ASTE1Q2TB18 679 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 LACTB2Q53H82 288 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 TEX44Q53QW1 395 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 ODF2Q5BJF6 829 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 FAM199XQ6PEV8 388 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 ABRAXAS1Q6UWZ7 409 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 MFSD7Q6UXD7 560 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 FAM151BQ6UXP7 276 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 FAM83HQ6ZRV2 1179 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 C11orf96Q7Z7L8 435 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 AVL9Q8NBF6 648 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 OR8K1Q8NGG5 319 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 GPR150Q8NGU9 434 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 TADA1Q96BN2 335 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 HAUS1Q96CS2 278 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 IQCDQ96DY2 449 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 TTC25Q96NG3 672 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 TIMM29Q9BSF4 260 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 TWSG1Q9GZX9 223 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 ZNF768Q9H5H4 540 aaKnown RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 AKIRIN1Q9H9L7 192 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 UCK1Q9HA47 277 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 SLC40A1Q9NP59 571 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 IL26Q9NPH9 171 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 RAD18Q9NS91 495 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 POT1Q9NUX5 634 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 ANAPC2Q9UJX6 822 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 PCDHB3Q9Y5E6 796 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 KCNMB2Q9Y691 235 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 CFAP20Q9Y6A4 193 aaKnown RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 UBR5O95071 2799 aaPredicted RBP8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 NOTCH2Q04721 2471 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 MED13Q9UHV7 2174 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 ICE1Q9Y2F5 2266 aa8.45□□□□□ -1.06
CTDNEP1-203ENST00000570385 IGHV5-51A0A0C4DH38 117 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 OR2AG2A6NM03 316 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 GPR89AB7ZAQ6 455 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 NTRK1P04629 796 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 CCNYL3P0C7X3 344 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 GPR89BP0CG08 455 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 FOLR1P15328 257 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 NFKB1P19838 968 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 HNRNPH3P31942 346 aaKnown RBP8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 CAPZBP47756 277 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 ARCN1P48444 511 aaKnown RBP8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 WNT3AP56704 352 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 RPS18P62269 152 aaKnown RBP8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 ADCY2Q08462 1091 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 WASHC5Q12768 1159 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 DNASE1L3Q13609 305 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 UBAP2LQ14157 1087 aaKnown RBP8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 MAP7Q14244 749 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 NFE2L1Q14494 772 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 IL11RAQ14626 422 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 PLCL1Q15111 1095 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 PPP2R5EQ16537 467 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 SIRPB2Q5JXA9 342 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 PDPK2PQ6A1A2 396 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 DUS1LQ6P1R4 473 aaKnown RBP8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 FBXO38Q6PIJ6 1188 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 DET1Q7L5Y6 550 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 ZC3H18Q86VM9 953 aaKnown RBP8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 AMZ2Q86W34 360 aa8.44□□□□□ -1.06
CTDNEP1-203ENST00000570385 PPP1R3BQ86XI6 285 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms