RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 FESP07332 822 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 SRPRAP08240 638 aaKnown RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 DLDP09622 509 aaKnown RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 ALDOCP09972 364 aaKnown RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 P4HA1P13674 534 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 PTPN2P17706 415 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 ERCC2P18074 760 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 PON1P27169 355 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 POU1F1P28069 291 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 APOBEC3AP31941 199 aaPredicted RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CDAP32320 146 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 SLC8A1P32418 973 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 NBL1P41271 181 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 MTHFRP42898 656 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 AGTR2P50052 363 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 NPY4RP50391 375 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CCR3P51677 355 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 JAK3P52333 1124 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 ADPRHP54922 357 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 SLC12A2P55011 1212 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CSE1LP55060 971 aaKnown RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 F2RL1P55085 397 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 SLC37A1P57057 533 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 SUMO2P61956 95 aaKnown RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CXADRP78310 365 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 RAE1P78406 368 aaKnown RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 IL1RL1Q01638 556 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 ITIH3Q06033 890 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 SCN1BQ07699 218 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 ACTN3Q08043 901 aaPredicted RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 ITGB3BPQ13352 177 aaPredicted RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 RUNX2Q13950 521 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 IL11RAQ14626 422 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 PTPN14Q15678 1187 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CYP1B1Q16678 543 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 UBE2SQ16763 222 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 GEN1Q17RS7 908 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 HYAL4Q2M3T9 481 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 TYSND1Q2T9J0 566 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 EDRF1Q3B7T1 1238 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 PDCD4Q53EL6 469 aaKnown RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 FBLN7Q53RD9 439 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 IGSF11Q5DX21 431 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 SPOUT1Q5T280 376 aaKnown RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 SERTAD4-AS1Q5TG53 156 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 DAB2IPQ5VWQ8 1189 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 B3GNTL1Q67FW5 361 aaPredicted RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 PMS2CLQ68D20 193 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 RAB12Q6IQ22 244 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CES5AQ6NT32 575 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CASC1Q6TDU7 716 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 IL20RBQ6UXL0 311 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 DPY19L3Q6ZPD9 716 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CLEC17AQ6ZS10 378 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 MSANTD1Q6ZTZ1 278 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 PTCHD4Q6ZW05 846 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 HTR3DQ70Z44 454 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CBLL1Q75N03 491 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 NUP54Q7Z3B4 507 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 NEK8Q86SG6 692 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 FAM124AQ86V42 546 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 TMEM200AQ86VY9 491 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 SGMS1Q86VZ5 419 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 ZNF761Q86XN6 746 aaPredicted RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 GSPT2Q8IYD1 628 aaKnown RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 ADGRF3Q8IZF5 1079 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 ABI1Q8IZP0 508 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 GHDCQ8N2G8 530 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 LRRC43Q8N309 656 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 SIRT6Q8N6T7 355 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 XXYLT1Q8NBI6 393 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 ZFPM2Q8WW38 1151 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 XAGE5Q8WWM1 108 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CASP10Q92851 521 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 ATOH1Q92858 354 aaPredicted RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 NACC2Q96BF6 587 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 MIEF2Q96C03 454 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 ZNF558Q96NG5 402 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 LMF1Q96S06 567 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 PRR25Q96S07 402 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 PAFAH2Q99487 392 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 AGAP2Q99490 1192 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CADM1Q9BY67 442 aaKnown RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 HRH4Q9H3N8 390 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 DENND2DQ9H6A0 471 aaPredicted RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 MID1IP1Q9NPA3 183 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 TMEM74BQ9NUR3 256 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 DDX43Q9NXZ2 648 aaKnown RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 GDE1Q9NZC3 331 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 SPG21Q9NZD8 308 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CACNG4Q9UBN1 327 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CNOT8Q9UFF9 292 aaKnown RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 SH2B3Q9UQQ2 575 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 B3GNT3Q9Y2A9 372 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 PKP3Q9Y446 797 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 MTF2Q9Y483 593 aaPredicted RBP3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CHST2Q9Y4C5 530 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 CLDN16Q9Y5I7 305 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 MYO10Q9HD67 2058 aa3.24□□□□□ -1.89
CNOT1-221ENST00000569924 EVPLQ92817 2033 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms