RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 PJA2O43164 708 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 MTSS1O43312 755 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 KRT86O43790 486 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 SPOPO43791 374 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 KCNJ13O60928 360 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 MTX2O75431 263 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 PMPCBO75439 489 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 RASSF9O75901 435 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 DLGAP3O95886 979 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 TNNT1P13805 278 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 TCN2P20062 427 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 HALP42357 657 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 CDC20Q12834 499 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 KIF5AQ12840 1032 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 TFDP2Q14188 446 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 AGAP9Q5VTM2 703 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 ZDHHC20Q5W0Z9 365 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 CYB5D1Q6P9G0 228 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 ABRAXAS1Q6UWZ7 409 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 WASH2PQ6VEQ5 465 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 PTRH1Q86Y79 214 aaKnown RBP12.91□□□□□ -0.34
SPG7-221ENST00000569720 TRAPPC5Q8IUR0 188 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 RASGRP3Q8IV61 690 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 UNC5BQ8IZJ1 945 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 RNF10Q8N5U6 811 aaKnown RBP12.91□□□□□ -0.34
SPG7-221ENST00000569720 BRSK1Q8TDC3 778 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 TFB1MQ8WVM0 346 aaKnown RBP12.91□□□□□ -0.34
SPG7-221ENST00000569720 STARD8Q92502 1023 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 TADA1Q96BN2 335 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 ZDHHC12Q96GR4 267 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 TEKT5Q96M29 485 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 TGM7Q96PF1 710 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 ULBP3Q9BZM4 244 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 ZCCHC2Q9C0B9 1178 aaKnown RBP12.91□□□□□ -0.34
SPG7-221ENST00000569720 TRABDQ9H4I3 376 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 WASH6PQ9NQA3 447 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 SIDT1Q9NXL6 827 aaKnown RBP12.91□□□□□ -0.34
SPG7-221ENST00000569720 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.91□□□□□ -0.34
SPG7-221ENST00000569720 ZNF624Q9P2J8 865 aaPredicted RBP12.91□□□□□ -0.34
SPG7-221ENST00000569720 FAM153AQ9UHL3 310 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 PCDHB3Q9Y5E6 796 aa12.91□□□□□ -0.34
SPG7-221ENST00000569720 TUBB4AP04350 444 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 PTPN3P26045 913 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 RPL10P27635 214 aaKnown RBP12.9□□□□□ -0.34
SPG7-221ENST00000569720 HMGCLP35914 325 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 STAT5AP42229 794 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 SEPHS1P49903 392 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 VAV2P52735 878 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 HADHBP55084 474 aaKnown RBP12.9□□□□□ -0.34
SPG7-221ENST00000569720 TLE1Q04724 770 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 TMEM115Q12893 351 aaPredicted RBP12.9□□□□□ -0.34
SPG7-221ENST00000569720 SEPT6Q14141 434 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 IL11RAQ14626 422 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 DEFB109BQ30KR1 87 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 CRTC2Q53ET0 693 aaPredicted RBP12.9□□□□□ -0.34
SPG7-221ENST00000569720 FAM182AQ5T1J6 154 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 C16orf46Q6P387 395 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 C6orf15Q6UXA7 325 aaPredicted RBP12.9□□□□□ -0.34
SPG7-221ENST00000569720 MFSD7Q6UXD7 560 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 RAD9BQ6WBX8 426 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 C9orf43Q8TAL5 461 aaPredicted RBP12.9□□□□□ -0.34
SPG7-221ENST00000569720 APOBEC4Q8WW27 367 aaKnown RBP12.9□□□□□ -0.34
SPG7-221ENST00000569720 COL26A1Q96A83 441 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 STAMBPL1Q96FJ0 436 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 OR6C1Q96RD1 312 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 ZNF768Q9H5H4 540 aaKnown RBP12.9□□□□□ -0.34
SPG7-221ENST00000569720 BPIFA1Q9NP55 256 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 SLC40A1Q9NP59 571 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 SPTLC3Q9NUV7 552 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 UBP1Q9NZI7 540 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 OGFRQ9NZT2 677 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 HACD3Q9P035 362 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 SPO11Q9Y5K1 396 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 SLC30A1Q9Y6M5 507 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 RPS6KL1Q9Y6S9 549 aa12.9□□□□□ -0.34
SPG7-221ENST00000569720 AURKAO14965 403 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 EPOP01588 193 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 CAPZBP47756 277 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 DRG2P55039 364 aaKnown RBP12.89□□□□□ -0.35
SPG7-221ENST00000569720 GPR18Q14330 331 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 PRKD1Q15139 912 aaPredicted RBP12.89□□□□□ -0.35
SPG7-221ENST00000569720 ATP13A5Q4VNC0 1218 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 LDLRAP1Q5SW96 308 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 CACHD1Q5VU97 1274 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 KAZNQ674X7 775 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 IRGCQ6NXR0 463 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 KLHL35Q6PF15 583 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 B4GALNT4Q76KP1 1039 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 PRSS42Q7Z5A4 293 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 KIAA1328Q86T90 577 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 ZNF547Q8IVP9 402 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 DTX3LQ8TDB6 740 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 KLHL8Q9P2G9 620 aaPredicted RBP12.89□□□□□ -0.35
SPG7-221ENST00000569720 TRIM10Q9UDY6 481 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 ANAPC2Q9UJX6 822 aa12.89□□□□□ -0.35
SPG7-221ENST00000569720 LOC285095A0A1B0GVY8 99 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 PRR19A6NJB7 356 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 OR52A4PA6NMU1 304 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 PSTPIP1O43586 416 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 CST8O60676 142 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms