RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ARSHQ5FYA8 562 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF567Q8N184 647 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 MAFIPQ8WZ33 124 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 SDCBP2Q9H190 292 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 FNDC3AQ9Y2H6 1198 aaKnown RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 VWA7Q9Y334 891 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 PCDHB1Q9Y5F3 818 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 MAU2Q9Y6X3 613 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 C2orf71A6NGG8 1288 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 KDM4BO94953 1096 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 FGF1P05230 155 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 DNASE1P24855 282 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 HMGN3Q15651 99 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 GCNT7Q6ZNI0 430 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 ILDR2Q71H61 639 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 FBXO33Q7Z6M2 555 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 B3GALNT2Q8NCR0 500 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 OR52K2Q8NGK3 314 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 TERB2Q8NHR7 220 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 VMP1Q96GC9 406 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 FAM84BQ96KN1 310 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 APBA2Q99767 749 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 GAL3ST1Q99999 423 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 BRD9Q9H8M2 597 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 KCNMB3Q9NPA1 279 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 KCNIP3Q9Y2W7 256 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 EXOSC1Q9Y3B2 195 aaKnown RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 INPPL1O15357 1258 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 YKT6O15498 198 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 DLDP09622 509 aaKnown RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 RAB3AP20336 220 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 PTPN3P26045 913 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 SCNN1AP37088 669 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 ETV3P41162 512 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 PWP1Q13610 501 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 IFI44LQ53G44 452 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 ZDHHC20Q5W0Z9 365 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 LRRC66Q68CR7 880 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 METAP1DQ6UB28 335 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 SERPINA13PQ6UXR4 307 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 IDO2Q6ZQW0 420 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 HAVCR2Q8TDQ0 301 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 OR52E6Q96RD3 313 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CTRCQ99895 268 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CBWD1Q9BRT8 395 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 HSD3B7Q9H2F3 369 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 RBM22Q9NW64 420 aaKnown RBP eCLIP7.05□□□□□ -1.283e-7■■■■■ 36.9
CNOT1-216ENST00000569240 PPP4R1LQ9P1A2 415 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 SNX4O95219 450 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CATP04040 527 aaKnown RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF14P17017 642 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 TNNI3P19429 210 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 KIR3DL1P43629 444 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 NCS1P62166 190 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 GALEQ14376 348 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 EIF4HQ15056 248 aaKnown RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 ARL13AQ5H913 290 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 C6orf141Q5SZD1 244 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 TCEAL6Q6IPX3 200 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 ZCCHC12Q6PEW1 402 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CARM1Q86X55 608 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CMTR2Q8IYT2 770 aaKnown RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 AGAP2Q99490 1192 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CPQQ9Y646 472 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 WASH4PA8MWX3 477 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 AQP9O43315 295 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 SPARCP09486 303 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 GDI2P50395 445 aaKnown RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 RAB5CP51148 216 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 GRM2Q14416 872 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 LDLRAP1Q5SW96 308 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 NCEH1Q6PIU2 408 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 SLC2A7Q6PXP3 512 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 USP30Q70CQ3 517 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 HDDC3Q8N4P3 179 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 SGTBQ96EQ0 304 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 PPP1R16AQ96I34 528 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 PHB2Q99623 299 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CST11Q9H112 138 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 RPF2Q9H7B2 306 aaKnown RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 VRTNQ9H8Y1 702 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 ZBTB26Q9HCK0 441 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 C1orf109Q9NX04 203 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 SRRDQ9UH36 339 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 KLHL21Q9UJP4 597 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 MRPS7Q9Y2R9 242 aaKnown RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 TAF6LQ9Y6J9 622 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CEP170BQ9Y4F5 1589 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CXCR6O00574 342 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 EGFRP00533 1210 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 MMP8P22894 467 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CRKLP46109 303 aaKnown RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 ERVK-8P63133 956 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 MRPS10P82664 201 aaKnown RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CCNIQ14094 377 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 C10orf62Q5T681 223 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CAND1Q86VP6 1230 aaKnown RBP7.05□□□□□ -1.28
CNOT1-216ENST00000569240 OXR1Q8N573 874 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CHST13Q8NET6 341 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 ABHD11Q8NFV4 315 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms