RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 ARNT2Q9HBZ2 717 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 WASH6PQ9NQA3 447 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 SIDT1Q9NXL6 827 aaKnown RBP7.7□□□□□ -1.18
CDH3-209ENST00000569080 ZNF624Q9P2J8 865 aaPredicted RBP7.7□□□□□ -1.18
CDH3-209ENST00000569080 CPNE7Q9UBL6 633 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 WDR37Q9Y2I8 494 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 KCTD3Q9Y597 815 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 ARL5AQ9Y689 179 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 ZNF462Q96JM2 2506 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 C5orf60A6NFR6 353 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 OR5K4A6NMS3 321 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 OR52A4PA6NMU1 304 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 B4E171 279 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 ERVH48-1M5A8F1 160 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 ZW10O43264 779 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 LDB2O43679 373 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 CDK14O94921 469 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 TJP3O95049 919 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 METTL18O95568 372 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 C9P02748 559 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 PRB1P04280 392 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 ANKRD34CP0C6C1 535 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 SLC2A4P14672 509 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 XRCC1P18887 633 aaPredicted RBP7.69□□□□□ -1.18
CDH3-209ENST00000569080 CD82P27701 267 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 TSPAN7P41732 249 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 MAPK10P53779 464 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 NAP1L1P55209 391 aaKnown RBP7.69□□□□□ -1.18
CDH3-209ENST00000569080 GFERP55789 205 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 KIF5AQ12840 1032 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 BIRC2Q13490 618 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 COL9A2Q14055 689 aaPredicted RBP7.69□□□□□ -1.18
CDH3-209ENST00000569080 TAF1AQ15573 450 aaPredicted RBP7.69□□□□□ -1.18
CDH3-209ENST00000569080 SEPT7Q16181 437 aaKnown RBP7.69□□□□□ -1.18
CDH3-209ENST00000569080 CCDC181Q5TID7 509 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 DARS2Q6PI48 645 aaKnown RBP7.69□□□□□ -1.18
CDH3-209ENST00000569080 SLC9B2Q86UD5 537 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 ZFAND4Q86XD8 727 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 TRAPPC5Q8IUR0 188 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 SYCE1Q8N0S2 351 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 AVL9Q8NBF6 648 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 LSM14AQ8ND56 463 aaKnown RBP7.69□□□□□ -1.18
CDH3-209ENST00000569080 AGBL5Q8NDL9 886 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 OR13C4Q8NGS5 318 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 GPR150Q8NGU9 434 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 RSC1A1Q92681 617 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 RTP4Q96DX8 246 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 CCNL2Q96S94 520 aaPredicted RBP7.69□□□□□ -1.18
CDH3-209ENST00000569080 C19orf43Q9BQ61 176 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 DDA1Q9BW61 102 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 EPB41L1Q9H4G0 881 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 POT1Q9NUX5 634 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 OCIAD1Q9NX40 245 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.69□□□□□ -1.18
CDH3-209ENST00000569080 FKBPLQ9UIM3 349 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 AMFRQ9UKV5 643 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 DNAJC16Q9Y2G8 782 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 AAR2Q9Y312 384 aaKnown RBP7.69□□□□□ -1.18
CDH3-209ENST00000569080 PKP3Q9Y446 797 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 B3GALT1Q9Y5Z6 326 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 SLC30A1Q9Y6M5 507 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 TENM4Q6N022 2769 aa7.69□□□□□ -1.18
CDH3-209ENST00000569080 COL6A6A6NMZ7 2263 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 TLN1Q9Y490 2541 aaKnown RBP7.68□□□□□ -1.18
CDH3-209ENST00000569080 IGLV3-16A0A075B6K0 115 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 PDZK1P1A8MUH7 402 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 TK2O00142 265 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 ZNF189O75820 626 aaPredicted RBP7.68□□□□□ -1.18
CDH3-209ENST00000569080 SRP72O76094 671 aaKnown RBP7.68□□□□□ -1.18
CDH3-209ENST00000569080 LPOP22079 712 aaPredicted RBP7.68□□□□□ -1.18
CDH3-209ENST00000569080 PSMA3P25788 255 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 RPL10P27635 214 aaKnown RBP7.68□□□□□ -1.18
CDH3-209ENST00000569080 CAPZBP47756 277 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 DRG2P55039 364 aaKnown RBP7.68□□□□□ -1.18
CDH3-209ENST00000569080 RHDQ02161 417 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 ITGA9Q13797 1035 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 GPR18Q14330 331 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 NFE2L1Q14494 772 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 SPARCL1Q14515 664 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 CLCA4Q14CN2 919 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 OASLQ15646 514 aaKnown RBP7.68□□□□□ -1.18
CDH3-209ENST00000569080 ZNF658BQ4V348 819 aaPredicted RBP7.68□□□□□ -1.18
CDH3-209ENST00000569080 LDLRAP1Q5SW96 308 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 KIAA1614Q5VZ46 1190 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 TMEM26Q6ZUK4 368 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 VASH2Q86V25 355 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 UBL4BQ8N7F7 174 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 BEND7Q8N7W2 519 aaPredicted RBP7.68□□□□□ -1.18
CDH3-209ENST00000569080 FAM71DQ8N9W8 422 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 OR4K2Q8NGD2 314 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 BRSK1Q8TDC3 778 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 NAT14Q8WUY8 206 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 ATG4AQ8WYN0 398 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 SLC39A7Q92504 469 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 ART4Q93070 314 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 SH3KBP1Q96B97 665 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 TBL1YQ9BQ87 522 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.68□□□□□ -1.18
CDH3-209ENST00000569080 SPRY4Q9C004 299 aa7.68□□□□□ -1.18
CDH3-209ENST00000569080 ZCCHC2Q9C0B9 1178 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms