RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 NLRP9Q7RTR0 991 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 GALNT15Q8N3T1 639 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 MCUQ8NE86 351 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 OR6C4Q8NGE1 309 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 SLCO2A1Q92959 643 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 NAT6Q93015 286 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 MFSD3Q96ES6 412 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 DCUN1D1Q96GG9 259 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 C16orf45Q96MC5 204 aaPredicted RBP12.8□□□□□ -0.36
CNOT1-213ENST00000568158 KRT12Q99456 494 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 COPS8Q99627 209 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 ZCCHC2Q9C0B9 1178 aaKnown RBP12.8□□□□□ -0.36
CNOT1-213ENST00000568158 IL22Q9GZX6 179 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 SYNDIG1Q9H7V2 258 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 ASIC3Q9UHC3 531 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 MSRB2Q9Y3D2 182 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 NEUROG3Q9Y4Z2 214 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 DNMT3AQ9Y6K1 912 aaPredicted RBP12.8□□□□□ -0.36
CNOT1-213ENST00000568158 PRSS21Q9Y6M0 314 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 SPEGQ15772 3267 aa12.8□□□□□ -0.36
CNOT1-213ENST00000568158 BPTFQ12830 3046 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 A0A1W2PQM1 296 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 A6NCN8 305 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 PRR19A6NJB7 356 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 RHPN2P1A8MT19 583 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 DNALI1O14645 258 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-213ENST00000568158 TTI1O43156 1089 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 NUDT21O43809 227 aaKnown RBP12.79□□□□□ -0.36
CNOT1-213ENST00000568158 IDSP22304 550 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 ALDH4A1P30038 563 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 DRG2P55039 364 aaKnown RBP12.79□□□□□ -0.36
CNOT1-213ENST00000568158 OR1D5P58170 312 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 PRAMEP78395 509 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 DR1Q01658 176 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 BIRC2Q13490 618 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 NFE2L1Q14494 772 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 SEMA3AQ14563 771 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 SEPT7Q16181 437 aaKnown RBP12.79□□□□□ -0.36
CNOT1-213ENST00000568158 RNASEH2BQ5TBB1 312 aaKnown RBP12.79□□□□□ -0.36
CNOT1-213ENST00000568158 CDCP2Q5VXM1 449 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 FAM83HQ6ZRV2 1179 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-213ENST00000568158 LDB1Q86U70 411 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-213ENST00000568158 AMZ2Q86W34 360 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 ZNF761Q86XN6 746 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-213ENST00000568158 JAMLQ86YT9 394 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 PPIL6Q8IXY8 311 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 AGGF1Q8N302 714 aaeCLIP12.79□□□□□ -0.36
CNOT1-213ENST00000568158 CLDN19Q8N6F1 224 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 SPATA4Q8NEY3 305 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 OR4L1Q8NH43 312 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 SLC37A2Q8TED4 501 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 SERPINB12Q96P63 405 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 TRIM56Q9BRZ2 755 aaKnown RBP12.79□□□□□ -0.36
CNOT1-213ENST00000568158 TIMM29Q9BSF4 260 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 TRIM51Q9BSJ1 452 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 KIFC1Q9BW19 673 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 LRRN3Q9H3W5 708 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 TREX1Q9NSU2 369 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 FAM8A1Q9UBU6 413 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 ATXN7L1Q9ULK2 861 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-213ENST00000568158 SOX13Q9UN79 622 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 CLCA2Q9UQC9 943 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 NCOR2Q9Y618 2525 aa12.79□□□□□ -0.36
CNOT1-213ENST00000568158 IGLV3-16A0A075B6K0 115 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 PRAMEF33A0A0G2JMD5 474 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 TRABD2BA6NFA1 517 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 MGAT4DA6NG13 374 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 SDR42E2A6NKP2 422 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 NTN3O00634 580 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-213ENST00000568158 RPLP0P05388 317 aaKnown RBP12.78□□□□□ -0.36
CNOT1-213ENST00000568158 RALBP11234 206 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 MLNP12872 115 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 F3P13726 295 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 BRAFP15056 766 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 PNLIPP16233 465 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 SLC19A1P41440 591 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 C2orf54Q08AI8 447 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 CAMK2BQ13554 666 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 CLCA4Q14CN2 919 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 AMZ1Q400G9 498 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 FASTKD1Q53R41 847 aaKnown RBP12.78□□□□□ -0.36
CNOT1-213ENST00000568158 IZUMO3Q5VZ72 239 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 CASC4Q6P4E1 433 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 ABRAXAS1Q6UWZ7 409 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 USP53Q70EK8 1073 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 CFAP206Q8IYR0 622 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 SFRP1Q8N474 314 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 LILRA3Q8N6C8 439 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-213ENST00000568158 HEXDCQ8WVB3 486 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 ZNF592Q92610 1267 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 TRIM44Q96DX7 344 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-213ENST00000568158 ZNF514Q96K75 400 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-213ENST00000568158 SIGLEC10Q96LC7 697 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 RUNDC3BQ96NL0 473 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 FCRL3Q96P31 734 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-213ENST00000568158 TRIM31Q9BZY9 425 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 MARCH4Q9P2E8 410 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-213ENST00000568158 ZNF624Q9P2J8 865 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-213ENST00000568158 PSMD13Q9UNM6 376 aa12.78□□□□□ -0.36
CNOT1-213ENST00000568158 WDR37Q9Y2I8 494 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms