RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 DNAJC18Q9H819 358 aa4.63□□□□□ -1.67
SHCBP1-206ENST00000567698 GIMAP4Q9NUV9 329 aa4.63□□□□□ -1.67
SHCBP1-206ENST00000567698 RPS6KA6Q9UK32 745 aa4.63□□□□□ -1.67
SHCBP1-206ENST00000567698 ZNF644Q9H582 1327 aaPredicted RBP4.63□□□□□ -1.67
SHCBP1-206ENST00000567698 GLOD5A6NK44 160 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 TMEM178BH3BS89 294 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 TMEM189-UBE2V1I3L0A0 370 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 ACOT8O14734 319 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 WDR1O75083 606 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 GCNT3O95395 438 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 GH2P01242 217 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 FAM106CPP0CH98 169 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 TKTP29401 623 aaKnown RBP4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 ZNF132P52740 706 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 CTSCP53634 463 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 UBE2V1Q13404 147 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 GTF2H2Q13888 395 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 NTRK2Q16620 822 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 IZUMO4Q1ZYL8 232 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 FAM109BQ6ICB4 259 aaPredicted RBP4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 CAPRIN2Q6IMN6 1127 aaKnown RBP4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 GTF2H2CQ6P1K8 395 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 UNQ6126/PRO20091Q6UXV3 157 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 DSG4Q86SJ6 1040 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 KMT5CQ86Y97 462 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 TAGAPQ8N103 731 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 SLC5A8Q8N695 610 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 KBTBD3Q8NAB2 608 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 PRPF31Q8WWY3 499 aaKnown RBP4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 NEUROD6Q96NK8 337 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 DUX5Q96PT3 197 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 ABHD1Q96SE0 405 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 RAD21L1Q9H4I0 556 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 ARHGEF38Q9NXL2 777 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 ZNF541Q9H0D2 1346 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 SCN5AQ14524 2016 aa4.62□□□□□ -1.67
SHCBP1-206ENST00000567698 LRRC72A6NJI9 287 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 PLK4O00444 970 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 EIF3DO15371 548 aaKnown RBP eCLIP4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 ZNHIT1O43257 154 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 ARCN1P48444 511 aaKnown RBP4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 ERVFC1-1P60608 527 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 TMF1P82094 1093 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 TROAPQ12815 778 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 BAATQ14032 418 aaPredicted RBP4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 MEP1AQ16819 746 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 GARNL3Q5VVW2 1013 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 RUSC1-AS1Q66K80 236 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 SPSB3Q6PJ21 355 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 ZNF704Q6ZNC4 412 aaPredicted RBP4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 SMIM29Q86T20 159 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 LDB1Q86U70 411 aaPredicted RBP4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 SFR1Q86XK3 245 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 CIARTQ8N365 385 aaPredicted RBP4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 NME8Q8N427 588 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 TAS1R2Q8TE23 839 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 CDCA5Q96FF9 252 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 KIFC3Q9BVG8 833 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 TMX4Q9H1E5 349 aaPredicted RBP4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 SLA2Q9H6Q3 261 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 EVA1AQ9H8M9 152 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 CLIC5Q9NZA1 410 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 CHORDC1Q9UHD1 332 aaPredicted RBP4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 ZNF148Q9UQR1 794 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 PCDHGA5Q9Y5G8 931 aa4.61□□□□□ -1.67
SHCBP1-206ENST00000567698 GPR75-ASB3A0A0A6YYF3 556 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 FEZF1A0PJY2 475 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 ASPDHA6ND91 283 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 A8MV72 311 aaPredicted RBP4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 CLGNO14967 610 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 STARD3NLO95772 234 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 POLR2CP19387 275 aaPredicted RBP4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 NR2F2P24468 414 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 NNMTP40261 264 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 RPL24P83731 157 aaKnown RBP4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 PLXDC2Q6UX71 529 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 FOXL2NBQ6ZUU3 175 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 MINDY1Q8N5J2 469 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 RFLNBQ8N5W9 214 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 LSMEM1Q8N8F7 131 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 TBC1D16Q8TBP0 767 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 TMEM255BQ8WV15 326 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 DNAAF4Q8WXU2 420 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 ZNF622Q969S3 477 aaKnown RBP eCLIP4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 TMCO6Q96DC7 493 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 RTN4RQ9BZR6 473 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 LARSQ9P2J5 1176 aaKnown RBP4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 CRNNQ9UBG3 495 aaPredicted RBP4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 AMACRQ9UHK6 382 aa4.6□□□□□ -1.67
SHCBP1-206ENST00000567698 TEX13DA0A0J9YY54 714 aaPredicted RBP4.59□□□□□ -1.67
SHCBP1-206ENST00000567698 TO15178 435 aa4.59□□□□□ -1.67
SHCBP1-206ENST00000567698 NDUFS4O43181 175 aa4.59□□□□□ -1.67
SHCBP1-206ENST00000567698 AVILO75366 819 aa4.59□□□□□ -1.67
SHCBP1-206ENST00000567698 TOMM70O94826 608 aa4.59□□□□□ -1.67
SHCBP1-206ENST00000567698 CSPG5O95196 566 aa4.59□□□□□ -1.67
SHCBP1-206ENST00000567698 NR1D1P20393 614 aa4.59□□□□□ -1.67
SHCBP1-206ENST00000567698 CD81P60033 236 aa4.59□□□□□ -1.67
SHCBP1-206ENST00000567698 PNRC1Q12796 327 aaPredicted RBP4.59□□□□□ -1.67
SHCBP1-206ENST00000567698 GAGE2BQ13066 116 aa4.59□□□□□ -1.67
SHCBP1-206ENST00000567698 GAGE2EQ4V326 116 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms