RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 PDE1BQ01064 536 aa18.47■□□□□ 0.55
IFT140-208ENST00000566818 COL9A2Q14055 689 aaPredicted RBP18.47■□□□□ 0.55
IFT140-208ENST00000566818 TAF1AQ15573 450 aaPredicted RBP18.47■□□□□ 0.55
IFT140-208ENST00000566818 SNAP47Q5SQN1 464 aa18.47■□□□□ 0.55
IFT140-208ENST00000566818 MANEAQ5SRI9 462 aa18.47■□□□□ 0.55
IFT140-208ENST00000566818 AGAP9Q5VTM2 703 aa18.47■□□□□ 0.55
IFT140-208ENST00000566818 AADACL2Q6P093 401 aa18.47■□□□□ 0.55
IFT140-208ENST00000566818 ZFAND4Q86XD8 727 aa18.47■□□□□ 0.55
IFT140-208ENST00000566818 ZNF547Q8IVP9 402 aa18.47■□□□□ 0.55
IFT140-208ENST00000566818 RBM12BQ8IXT5 1001 aaKnown RBP18.47■□□□□ 0.55
IFT140-208ENST00000566818 WBP1Q96G27 269 aa18.47■□□□□ 0.55
IFT140-208ENST00000566818 GORASP1Q9BQQ3 440 aa18.47■□□□□ 0.55
IFT140-208ENST00000566818 ASPSCR1Q9BZE9 553 aa18.47■□□□□ 0.55
IFT140-208ENST00000566818 FEZ2Q9UHY8 353 aaPredicted RBP18.47■□□□□ 0.55
IFT140-208ENST00000566818 C5orf60A6NFR6 353 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 EFCAB7A8K855 629 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.46■□□□□ 0.55
IFT140-208ENST00000566818 PRAMEF1O95521 474 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 CRTAMO95727 393 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 FTCDO95954 541 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 FGF3P11487 239 aaPredicted RBP18.46■□□□□ 0.55
IFT140-208ENST00000566818 ADRA1AP35348 466 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 ATP1A2P50993 1020 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 TGIF1Q15583 401 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 GPRC6AQ5T6X5 926 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 WASH2PQ6VEQ5 465 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 ARHGEF18Q6ZSZ5 1173 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 TMEM26Q6ZUK4 368 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 PLXDC1Q8IUK5 500 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 CCDC110Q8TBZ0 833 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 ART4Q93070 314 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 CXorf40BQ96DE9 158 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 ZNF514Q96K75 400 aaPredicted RBP18.46■□□□□ 0.55
IFT140-208ENST00000566818 TBL1YQ9BQ87 522 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 TBC1D10AQ9BXI6 508 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 WASH6PQ9NQA3 447 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 SLC39A1Q9NY26 324 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 SCHIP1Q9P0W5 487 aaPredicted RBP18.46■□□□□ 0.55
IFT140-208ENST00000566818 ARL5AQ9Y689 179 aa18.46■□□□□ 0.55
IFT140-208ENST00000566818 SMG1Q96Q15 3661 aaKnown RBP18.46■□□□□ 0.55
IFT140-208ENST00000566818 PRR19A6NJB7 356 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 UGT1A9O60656 530 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 UGT1A6P19224 532 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 MSH3P20585 1137 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 UGT1A1P22309 533 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 UGT1A4P22310 534 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 UGT1A3P35503 534 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 LONRF2Q1L5Z9 754 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 DCAF12Q5T6F0 453 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 ABRAXAS1Q6UWZ7 409 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 RANBP10Q6VN20 620 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 C11orf96Q7Z7L8 435 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 AMZ2Q86W34 360 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 OR4K2Q8NGD2 314 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 TEFMQ96QE5 360 aaKnown RBP18.45■□□□□ 0.54
IFT140-208ENST00000566818 APOL2Q9BQE5 337 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 TSGA10Q9BZW7 698 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 UGT1A7Q9HAW7 530 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 UGT1A10Q9HAW8 530 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 UGT1A8Q9HAW9 530 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 TRIM10Q9UDY6 481 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 PACSIN2Q9UNF0 486 aaPredicted RBP18.45■□□□□ 0.54
IFT140-208ENST00000566818 AHCTF1Q8WYP5 2266 aa18.45■□□□□ 0.54
IFT140-208ENST00000566818 ZNF106Q9H2Y7 1883 aaKnown RBP18.45■□□□□ 0.54
IFT140-208ENST00000566818 MN1Q10571 1320 aaPredicted RBP18.45■□□□□ 0.54
IFT140-208ENST00000566818 A8MU76 341 aa18.44■□□□□ 0.54
IFT140-208ENST00000566818 GAPDHSO14556 408 aaPredicted RBP18.44■□□□□ 0.54
IFT140-208ENST00000566818 DDX3YO15523 660 aaKnown RBP18.44■□□□□ 0.54
IFT140-208ENST00000566818 GPR39O43194 453 aa18.44■□□□□ 0.54
IFT140-208ENST00000566818 UBXN7O94888 489 aa18.44■□□□□ 0.54
IFT140-208ENST00000566818 AMD1P17707 334 aa18.44■□□□□ 0.54
IFT140-208ENST00000566818 RPL10P27635 214 aaKnown RBP18.44■□□□□ 0.54
IFT140-208ENST00000566818 SLC19A1P41440 591 aa18.44■□□□□ 0.54
IFT140-208ENST00000566818 DRG2P55039 364 aaKnown RBP18.44■□□□□ 0.54
IFT140-208ENST00000566818 DMPKQ09013 629 aa18.44■□□□□ 0.54
IFT140-208ENST00000566818 ARHGAP22Q7Z5H3 698 aa18.44■□□□□ 0.54
IFT140-208ENST00000566818 DTX1Q86Y01 620 aa18.44■□□□□ 0.54
IFT140-208ENST00000566818 RNF10Q8N5U6 811 aaKnown RBP18.44■□□□□ 0.54
IFT140-208ENST00000566818 RASGEF1AQ8N9B8 481 aa18.44■□□□□ 0.54
IFT140-208ENST00000566818 ZSCAN1Q8NBB4 408 aa18.44■□□□□ 0.54
IFT140-208ENST00000566818 ZNF398Q8TD17 642 aa18.44■□□□□ 0.54
IFT140-208ENST00000566818 ZNF624Q9P2J8 865 aaPredicted RBP18.44■□□□□ 0.54
IFT140-208ENST00000566818 KLHL3Q9UH77 587 aa18.44■□□□□ 0.54
IFT140-208ENST00000566818 DNMT3AQ9Y6K1 912 aaPredicted RBP18.44■□□□□ 0.54
IFT140-208ENST00000566818 KLHL33A6NCF5 533 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 POP7O75817 140 aaKnown RBP18.43■□□□□ 0.54
IFT140-208ENST00000566818 ANKRD34CP0C6C1 535 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 BRAFP15056 766 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 GSDMDP57764 484 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 C19orf57Q0VDD7 668 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 P3H1Q32P28 736 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 SEL1L2Q5TEA6 688 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 TMEM220Q6QAJ8 160 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 ULK4Q96C45 1275 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 SGF29Q96ES7 293 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 HES6Q96HZ4 224 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 C19orf43Q9BQ61 176 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 ZPBPQ9BS86 351 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 OCIAD1Q9NX40 245 aa18.43■□□□□ 0.54
IFT140-208ENST00000566818 FKBPLQ9UIM3 349 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms