RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	ZNF398	Q8TD17	642 aa		13.63	□□□□□ -0.23
PKD1-231	ENST00000566784	ZNF514	Q96K75	400 aa	Predicted RBP	13.63	□□□□□ -0.23
PKD1-231	ENST00000566784	CCDC74B	Q96LY2	380 aa		13.63	□□□□□ -0.23
PKD1-231	ENST00000566784	LRRC40	Q9H9A6	602 aa		13.63	□□□□□ -0.23
PKD1-231	ENST00000566784	UGT1A7	Q9HAW7	530 aa		13.63	□□□□□ -0.23
PKD1-231	ENST00000566784	UGT1A10	Q9HAW8	530 aa		13.63	□□□□□ -0.23
PKD1-231	ENST00000566784	UGT1A8	Q9HAW9	530 aa		13.63	□□□□□ -0.23
PKD1-231	ENST00000566784	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.63	□□□□□ -0.23
PKD1-231	ENST00000566784	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.63	□□□□□ -0.23
PKD1-231	ENST00000566784	SDK2	Q58EX2	2172 aa		13.63	□□□□□ -0.23
PKD1-231	ENST00000566784	AGAP14	A8MT82	685 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	GPR39	O43194	453 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	KLK10	O43240	276 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	PSMD3	O43242	534 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	SRP72	O76094	671 aa	Known RBP	13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	METTL18	O95568	372 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	ITIH1	P19827	911 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	IDS	P22304	550 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	CA5A	P35218	305 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	HADHA	P40939	763 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	ETV5	P41161	510 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	ZNF140	P52738	457 aa	Predicted RBP	13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	TMPRSS3	P57727	454 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	XIAP	P98170	497 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	NFATC2	Q13469	925 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	SPARCL1	Q14515	664 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	OASL	Q15646	514 aa	Known RBP	13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	AMZ2	Q86W34	360 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	JAML	Q86YT9	394 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	RASGEF1A	Q8N9B8	481 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	RCBTB1	Q8NDN9	531 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	FCRL3	Q96P31	734 aa	Predicted RBP	13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	ALS2CR12	Q96Q35	445 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	FKBPL	Q9UIM3	349 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	DNAJC16	Q9Y2G8	782 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	KCTD3	Q9Y597	815 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	MGA	Q8IWI9	3026 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	LOC400499	M0QZD8	3231 aa		13.62	□□□□□ -0.23
PKD1-231	ENST00000566784	KLHL33	A6NCF5	533 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	ERI2	A8K979	691 aa	Known RBP	13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	PDZK1P1	A8MUH7	402 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	LDB2	O43679	373 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	LIAS	O43766	372 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	AP2A1	O95782	977 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	VIP	P01282	170 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	BRAF	P15056	766 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	MSH3	P20585	1137 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	CD82	P27701	267 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	SLC19A1	P41440	591 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	CTSC	P53634	463 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	CLN3	Q13286	438 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	RPS6KA1	Q15418	735 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	LONRF2	Q1L5Z9	754 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	TMEM220	Q6QAJ8	160 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	TMEM26	Q6ZUK4	368 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	GPR155	Q7Z3F1	870 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	TRIM48	Q8IWZ4	208 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	RBM12B	Q8IXT5	1001 aa	Known RBP	13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	AGBL5	Q8NDL9	886 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	OR13C4	Q8NGS5	318 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	ATG4A	Q8WYN0	398 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	ULK4	Q96C45	1275 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	ZMYND15	Q9H091	742 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	ASB8	Q9H765	288 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	POT1	Q9NUX5	634 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	TMEM9	Q9P0T7	183 aa		13.61	□□□□□ -0.23
PKD1-231	ENST00000566784	PRAMEF33	A0A0G2JMD5	474 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	TEX51	A0A1B0GUA7	166 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	OR2AG2	A6NM03	316 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784		H7C0S8	307 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	NRDC	O43847	1150 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	PRAMEF10	O60809	474 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	POP7	O75817	140 aa	Known RBP	13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	RPL10	P27635	214 aa	Known RBP	13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	AKT1	P31749	480 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	CSTF2	P33240	577 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	FDFT1	P37268	417 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	PPM1F	P49593	454 aa	Predicted RBP	13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	MAPK10	P53779	464 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	CXADR	P78310	365 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	CCZ1B	P86790	482 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	CCZ1	P86791	482 aa	Predicted RBP	13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	SEPT7	Q16181	437 aa	Known RBP	13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	TMEM164	Q5U3C3	297 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	ARHGAP22	Q7Z5H3	698 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	SNX20	Q7Z614	316 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	LINC00523	Q86TU6	105 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	TRIM58	Q8NG06	486 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	SNRNP27	Q8WVK2	155 aa	Known RBP	13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	USP7	Q93009	1102 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	TAAR9	Q96RI9	348 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	TBC1D10A	Q9BXI6	508 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	LZTFL1	Q9NQ48	299 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	PCDHGA3	Q9Y5H0	932 aa		13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	MN1	Q10571	1320 aa	Predicted RBP	13.6	□□□□□ -0.23
PKD1-231	ENST00000566784	SMG1	Q96Q15	3661 aa	Known RBP	13.6	□□□□□ -0.23
PKD1-231	ENST00000566784		B4E171	279 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms