RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 CSRP2Q16527 193 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 HLA-BQ31612 363 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 HSP90AA5PQ58FG0 334 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 WDR93Q6P2C0 686 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 PACS1Q6VY07 963 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 PRR23CQ6ZRP0 262 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 DET1Q7L5Y6 550 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 ASCL5Q7RTU5 278 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 RD3Q7Z3Z2 195 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 SDCCAG8Q86SQ7 713 aaPredicted RBP11.33□□□□□ -0.6
KARS-207ENST00000566560 CILP2Q8IUL8 1156 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 TRAPPC5Q8IUR0 188 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 RELL1Q8IUW5 271 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 DENND6AQ8IWF6 608 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 LMNTD2Q8IXW0 634 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 RBFAQ8N0V3 343 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 DCLK2Q8N568 766 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 OR2I1PQ8NGU4 316 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 GPR150Q8NGU9 434 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 TSACCQ96A04 125 aaPredicted RBP11.33□□□□□ -0.6
KARS-207ENST00000566560 OR2M4Q96R27 311 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 ELF4Q99607 663 aaPredicted RBP11.33□□□□□ -0.6
KARS-207ENST00000566560 EDEM2Q9BV94 578 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 BOCQ9BWV1 1114 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 SLC13A1Q9BZW2 595 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 RMI1Q9H9A7 625 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 ERVMER34-1Q9H9K5 563 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 IARS2Q9NSE4 1012 aaKnown RBP11.33□□□□□ -0.6
KARS-207ENST00000566560 NINJ2Q9NZG7 142 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 SLC17A6Q9P2U8 582 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 PNMA8BQ9ULN7 279 aaPredicted RBP11.33□□□□□ -0.6
KARS-207ENST00000566560 DGKBQ9Y6T7 804 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 ZFHX2Q9C0A1 2572 aaPredicted RBP11.32□□□□□ -0.6
KARS-207ENST00000566560 IGLV3-16A0A075B6K0 115 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 TCRBV9S1A1TA0A576 114 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 UBA6A0AVT1 1052 aaPredicted RBP11.32□□□□□ -0.6
KARS-207ENST00000566560 OR2AG2A6NM03 316 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 PFDN6O15212 129 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 YKT6O15498 198 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 NUAK1O60285 661 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 SDC3O75056 442 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 DNAJC6O75061 913 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 NDUFS3O75489 264 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 CDK14O94921 469 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 ACSL3O95573 720 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 TNFP01375 233 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 CSF2P04141 144 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 F7P08709 466 aaPredicted RBP11.32□□□□□ -0.6
KARS-207ENST00000566560 FAM153BP0C7A2 387 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 EPHA8P29322 1005 aaPredicted RBP11.32□□□□□ -0.6
KARS-207ENST00000566560 STX2P32856 288 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 PHBP35232 272 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 NSG1P42857 185 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 CTSCP53634 463 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 GPX6P59796 221 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 HNRNPKP61978 463 aaKnown RBP eCLIP11.32□□□□□ -0.6
KARS-207ENST00000566560 MPP1Q00013 466 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 B4GALNT1Q00973 533 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 IL9RQ01113 521 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 MGAT5Q09328 741 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 TMEM115Q12893 351 aaPredicted RBP11.32□□□□□ -0.6
KARS-207ENST00000566560 TCEA2Q15560 299 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 ZNF423Q2M1K9 1284 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 PLA2G4EQ3MJ16 856 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 FAM153CQ494X1 144 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 AASDHQ4L235 1098 aaPredicted RBP11.32□□□□□ -0.6
KARS-207ENST00000566560 PRAMEF14Q5SWL7 426 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 LRRTM4Q86VH4 590 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 CNTN4Q8IWV2 1026 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 MINDY1Q8N5J2 469 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 PNPLA1Q8N8W4 532 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 RASGEF1AQ8N9B8 481 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 NAT14Q8WUY8 206 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.32□□□□□ -0.6
KARS-207ENST00000566560 CDKL2Q92772 493 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 LRRC61Q9BV99 259 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 TCEAL2Q9H3H9 227 aaPredicted RBP11.32□□□□□ -0.6
KARS-207ENST00000566560 GAREM1Q9H706 876 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 LRRC4CQ9HCJ2 640 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 ZFATQ9P243 1243 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 KLF15Q9UIH9 416 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 PRKAB1Q9Y478 270 aa11.32□□□□□ -0.6
KARS-207ENST00000566560 A0A1B0GTQ1 180 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 PRMT5O14744 637 aaPredicted RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 CHUKO15111 745 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 GRID2O43424 1007 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 OR1I1O60431 355 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 DFNA5O60443 496 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 FOXD2O60548 495 aaPredicted RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 PIAS2O75928 621 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 ACP5P13686 325 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 ATP1B2P14415 290 aaPredicted RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 ZNF7P17097 686 aaPredicted RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 PBLDP30039 288 aaPredicted RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 PRLHRP49683 370 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 EIF3BP55884 814 aaKnown RBP11.31□□□□□ -0.6
KARS-207ENST00000566560 CTBP1Q13363 440 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 KYNUQ16719 465 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 INSCQ1MX18 579 aa11.31□□□□□ -0.6
KARS-207ENST00000566560 BCL7AQ4VC05 210 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms