RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	WDR60	Q8WVS4	1066 aa		10.04	□□□□□ -0.8
TCF4-231	ENST00000566279	KIAA1191	Q96A73	305 aa		10.04	□□□□□ -0.8
TCF4-231	ENST00000566279	SHD	Q96IW2	340 aa		10.04	□□□□□ -0.8
TCF4-231	ENST00000566279	FAR2	Q96K12	515 aa		10.04	□□□□□ -0.8
TCF4-231	ENST00000566279	RPL10L	Q96L21	214 aa	Known RBP	10.04	□□□□□ -0.8
TCF4-231	ENST00000566279	TRMO	Q9BU70	441 aa		10.04	□□□□□ -0.8
TCF4-231	ENST00000566279	ERVK-6	Q9BXR3	956 aa		10.04	□□□□□ -0.8
TCF4-231	ENST00000566279	ATP13A3	Q9H7F0	1226 aa		10.04	□□□□□ -0.8
TCF4-231	ENST00000566279	SIT1	Q9Y3P8	196 aa		10.04	□□□□□ -0.8
TCF4-231	ENST00000566279	ANKRD12	Q6UB98	2062 aa		10.04	□□□□□ -0.8
TCF4-231	ENST00000566279	F5	P12259	2224 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	CAPN8	A6NHC0	703 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	MAN2B1	O00754	1011 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	PFDN6	O15212	129 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	VPS26A	O75436	327 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	TSPAN12	O95859	305 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	APOD	P05090	189 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	PYGL	P06737	847 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	COX4I1	P13073	169 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	PIK3R1	P27986	724 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	PTGER3	P43115	390 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	ADAR	P55265	1226 aa	Known RBP	10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	ATP6V0D1	P61421	351 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	SLC25A3	Q00325	362 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	BTK	Q06187	659 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	KHDC1	Q4VXA5	237 aa	Known RBP	10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	FAM219B	Q5XKK7	198 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	TAS2R42	Q7RTR8	314 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	SCUBE1	Q8IWY4	988 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	SIDT2	Q8NBJ9	832 aa	Known RBP	10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	OR2AP1	Q8NGE2	309 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	GRIN3A	Q8TCU5	1115 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	CD200R1	Q8TD46	325 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	CLPTM1L	Q96KA5	538 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	THTPA	Q9BU02	230 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	P2RY12	Q9H244	342 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	MTG2	Q9H4K7	406 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	HS3ST2	Q9Y278	367 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	KMT2E	Q8IZD2	1858 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	C1orf232	A0A0U1RR37	186 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	LOC100653049	A0A140TA62	436 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	CDC7	O00311	574 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	SLC22A2	O15244	555 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	SKAP2	O75563	359 aa	Predicted RBP	10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	KRT34	O76011	436 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	SUPT7L	O94864	414 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	SIX3	O95343	332 aa	Predicted RBP	10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	ESR1	P03372	595 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	TSPAN8	P19075	237 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	CA5A	P35218	305 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	HNF1B	P35680	557 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	PPARG	P37231	505 aa	Predicted RBP	10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	EIF2D	P41214	584 aa	Known RBP	10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	GRIA2	P42262	883 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	INHBC	P55103	352 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	SATB1	Q01826	763 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	ACSBG2	Q5FVE4	666 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	WLS	Q5T9L3	541 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	NXN	Q6DKJ4	435 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	C22orf39	Q6P5X5	142 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	FAM151B	Q6UXP7	276 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	NKAP	Q8N5F7	415 aa	Known RBP	10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	STAG3L4	Q8TBR4	150 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	KCNJ9	Q92806	393 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	CCDC97	Q96F63	343 aa	Predicted RBP	10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	CATSPER2	Q96P56	530 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	LENG8	Q96PV6	779 aa	Predicted RBP	10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	MEAF6	Q9HAF1	191 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	ZFYVE1	Q9HBF4	777 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	CACNA2D2	Q9NY47	1150 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	TRMT6	Q9UJA5	497 aa	Known RBP	10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	G3BP2	Q9UN86	482 aa	Known RBP	10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	FIS1	Q9Y3D6	152 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	COMMD10	Q9Y6G5	202 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279	SLC30A1	Q9Y6M5	507 aa		10.03	□□□□□ -0.8
TCF4-231	ENST00000566279		A0A088AWK7	358 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	CCDC189	A1A4V9	331 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	NPEPPSL1	A6NEC2	478 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	LRRC14B	A6NHZ5	514 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	CLDN7	O95471	211 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	PRAMEF1	O95521	474 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	ITGAX	P20702	1163 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	DRD1	P21728	446 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	SERPINA4	P29622	427 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	KIR2DL1	P43626	348 aa	Predicted RBP	10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	SNRPD1	P62314	119 aa	Known RBP	10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	TSN	Q15631	228 aa	Known RBP	10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	PFKFB4	Q16877	469 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	MYLK3	Q32MK0	819 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	PREPL	Q4J6C6	727 aa	Predicted RBP	10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	PELI3	Q8N2H9	469 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	STK40	Q8N2I9	435 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	AFAP1L2	Q8N4X5	818 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	ZNF513	Q8N8E2	541 aa	Predicted RBP	10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	ACTRT2	Q8TDY3	377 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	FUBP1	Q96AE4	644 aa	Known RBP	10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	ISG20	Q96AZ6	181 aa	Known RBP	10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	MARK4	Q96L34	752 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	C19orf43	Q9BQ61	176 aa		10.02	□□□□□ -0.81
TCF4-231	ENST00000566279	DLGAP2	Q9P1A6	1054 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms