RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 TDRPQ86YL5 185 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 CILP2Q8IUL8 1156 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 UNC5BQ8IZJ1 945 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 OR56A4Q8NGH8 313 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 CCT6BQ92526 530 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 CDC42EP4Q9H3Q1 356 aaKnown RBP12.47□□□□□ -0.41
SF3B3-206ENST00000565990 CATSPERZQ9NTU4 200 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 ZDHHC3Q9NYG2 299 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 MARCH4Q9P2E8 410 aaPredicted RBP12.47□□□□□ -0.41
SF3B3-206ENST00000565990 ATXN10Q9UBB4 475 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 FETUBQ9UGM5 382 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 KLF15Q9UIH9 416 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 CRLS1Q9UJA2 301 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 GMEB2Q9UKD1 530 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 GPR34Q9UPC5 381 aa12.47□□□□□ -0.41
SF3B3-206ENST00000565990 OTOGLQ3ZCN5 2332 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 CCT8L1PA6NM43 557 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 ARHGAP33O14559 1287 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 SGTAO43765 313 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 DNAJC6O75061 913 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 CDH16O75309 829 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 SPAG6O75602 509 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 CSF2P04141 144 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 SYPP08247 313 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 ERVK-10P10266 1014 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 ATP1B2P14415 290 aaPredicted RBP12.46□□□□□ -0.41
SF3B3-206ENST00000565990 OGNP20774 298 aaKnown RBP12.46□□□□□ -0.41
SF3B3-206ENST00000565990 POLD2P49005 469 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 TTPAP49638 278 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 ADARP55265 1226 aaKnown RBP12.46□□□□□ -0.41
SF3B3-206ENST00000565990 C21orf59P57076 290 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 SRP54P61011 504 aaKnown RBP12.46□□□□□ -0.41
SF3B3-206ENST00000565990 CSRP2Q16527 193 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 DBN1Q16643 649 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 TYSND1Q2T9J0 566 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 HLA-BQ31612 363 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 HSP90AA5PQ58FG0 334 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 AARS2Q5JTZ9 985 aaKnown RBP12.46□□□□□ -0.41
SF3B3-206ENST00000565990 TEDDM1Q5T9Z0 273 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 RNF187Q5TA31 235 aaPredicted RBP12.46□□□□□ -0.41
SF3B3-206ENST00000565990 MRNIPQ6NTE8 343 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 TRMT10BQ6PF06 316 aaKnown RBP12.46□□□□□ -0.41
SF3B3-206ENST00000565990 IL27RAQ6UWB1 636 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 ENPP7Q6UWV6 458 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 LAYNQ6UX15 382 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 PACS1Q6VY07 963 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 TAS2R42Q7RTR8 314 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 GALNT7Q86SF2 657 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 SDCCAG8Q86SQ7 713 aaPredicted RBP12.46□□□□□ -0.41
SF3B3-206ENST00000565990 CCDC25Q86WR0 208 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 PHYKPLQ8IUZ5 450 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 RASGEF1AQ8N9B8 481 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 CALML6Q8TD86 181 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 CERS2Q96G23 380 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 PHOX2BQ99453 314 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 TTC1Q99614 292 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 COPS8Q99627 209 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 YY1AP1Q9H869 796 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 C20orf96Q9NUD7 363 aaPredicted RBP12.46□□□□□ -0.41
SF3B3-206ENST00000565990 TMEM98Q9Y2Y6 226 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 SNX11Q9Y5W9 270 aa12.46□□□□□ -0.41
SF3B3-206ENST00000565990 DNMT3AQ9Y6K1 912 aaPredicted RBP12.46□□□□□ -0.41
SF3B3-206ENST00000565990 TCRBV9S1A1TA0A576 114 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 GOLGA8TH3BQL2 631 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 CDK14O94921 469 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 SHBGP04278 402 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 CFIP05156 583 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 ZNF8P17098 575 aaPredicted RBP12.45□□□□□ -0.42
SF3B3-206ENST00000565990 PPARGP37231 505 aaPredicted RBP12.45□□□□□ -0.42
SF3B3-206ENST00000565990 LEPRP48357 1165 aaKnown RBP12.45□□□□□ -0.42
SF3B3-206ENST00000565990 HK3P52790 923 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 PPARDQ03181 441 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 MGAT5Q09328 741 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 GRIK2Q13002 908 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 SHBQ15464 509 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 ALG11Q2TAA5 492 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 PYCR3Q53H96 274 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 ZNF648Q5T619 568 aaPredicted RBP12.45□□□□□ -0.42
SF3B3-206ENST00000565990 TRIM74Q86UV6 250 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 KCNMB4Q86W47 210 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 PARGQ86W56 976 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 ZNF547Q8IVP9 402 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 PNPLA1Q8N8W4 532 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 C2CD4AQ8NCU7 369 aaPredicted RBP12.45□□□□□ -0.42
SF3B3-206ENST00000565990 OR1E3Q8WZA6 343 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 ZBTB9Q96C00 473 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 CFAP36Q96G28 342 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 ZNF514Q96K75 400 aaPredicted RBP12.45□□□□□ -0.42
SF3B3-206ENST00000565990 SELENOSQ9BQE4 189 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 MCMBPQ9BTE3 642 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 NUSAP1Q9BXS6 441 aaKnown RBP12.45□□□□□ -0.42
SF3B3-206ENST00000565990 OR2AG1Q9H205 316 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 P2RY12Q9H244 342 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 FGF22Q9HCT0 170 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 MRPL40Q9NQ50 206 aaKnown RBP12.45□□□□□ -0.42
SF3B3-206ENST00000565990 SEMA4GQ9NTN9 838 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 INTS10Q9NVR2 710 aaKnown RBP12.45□□□□□ -0.42
SF3B3-206ENST00000565990 NINJ2Q9NZG7 142 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 IL1RAPL1Q9NZN1 696 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms