RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 P3H4Q92791 437 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 C9orf72Q96LT7 481 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 FBXO8Q9NRD0 319 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 IL17BQ9UHF5 180 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 KIF1CO43896 1103 aaKnown RBP23.33■■□□□ 1.33
RAB40C-209ENST00000565511 UBXN7O94888 489 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 ZRANB2O95218 330 aaKnown RBP eCLIP23.33■■□□□ 1.332e-6■■■□□ 16.1
RAB40C-209ENST00000565511 DLGAP3O95886 979 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 VIPP01282 170 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 ANKRD34CP0C6C1 535 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 ZNF28P17035 718 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 PPP1CAP62136 330 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 SH3BP2P78314 561 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 GPR18Q14330 331 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 BBS12Q6ZW61 710 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 BZW1Q7L1Q6 419 aaKnown RBP23.33■■□□□ 1.33
RAB40C-209ENST00000565511 PRICKLE2Q7Z3G6 844 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 TRIM48Q8IWZ4 208 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 TGM7Q96PF1 710 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 TRIM4Q9C037 500 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 EPB41L1Q9H4G0 881 aa23.33■■□□□ 1.33
RAB40C-209ENST00000565511 NKX2-8O15522 239 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 STK17BO94768 372 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 AGTP01019 485 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 RBL1P28749 1068 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 SPAM1P38567 509 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 AGAP9Q5VTM2 703 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 XKR5Q6UX68 686 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 CEACAM20Q6UY09 585 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 GLT6D1Q7Z4J2 308 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 PLXDC1Q8IUK5 500 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 RCOR2Q8IZ40 523 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 NLGN4XQ8N0W4 816 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 NLGN4YQ8NFZ3 816 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-209ENST00000565511 GDAP1Q8TB36 358 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 TEFMQ96QE5 360 aaKnown RBP23.32■■□□□ 1.32
RAB40C-209ENST00000565511 FAM118BQ9BPY3 351 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 TRIM5Q9C035 493 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 TRABDQ9H4I3 376 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 SLC40A1Q9NP59 571 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 RSPH14Q9UHP6 348 aa23.32■■□□□ 1.32
RAB40C-209ENST00000565511 TMEM184BQ9Y519 407 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-209ENST00000565511 SOWAHDA6NJG2 315 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 CAPN5O15484 640 aaPredicted RBP23.31■■□□□ 1.32
RAB40C-209ENST00000565511 MTSS1O43312 755 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 EPOP01588 193 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 SEPHS1P49903 392 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 PPP2R5EQ16537 467 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 AADACL2Q6P093 401 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 WASH2PQ6VEQ5 465 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 AVL9Q8NBF6 648 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 SRPK1Q96SB4 655 aaKnown RBP23.31■■□□□ 1.32
RAB40C-209ENST00000565511 FICDQ9BVA6 458 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 WASH6PQ9NQA3 447 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 POT1Q9NUX5 634 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 REXO2Q9Y3B8 237 aaKnown RBP23.31■■□□□ 1.32
RAB40C-209ENST00000565511 KCTD3Q9Y597 815 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 ARL5AQ9Y689 179 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 DUSP10Q9Y6W6 482 aa23.31■■□□□ 1.32
RAB40C-209ENST00000565511 GLYATL1P3A0A0U1RQE8 302 aa23.3■■□□□ 1.32
RAB40C-209ENST00000565511 HACD1B0YJ81 288 aa23.3■■□□□ 1.32
RAB40C-209ENST00000565511 HLA-DPA1P20036 260 aa23.3■■□□□ 1.32
RAB40C-209ENST00000565511 CAPZBP47756 277 aa23.3■■□□□ 1.32
RAB40C-209ENST00000565511 MPP3Q13368 585 aa23.3■■□□□ 1.32
RAB40C-209ENST00000565511 GPRC6AQ5T6X5 926 aa23.3■■□□□ 1.32
RAB40C-209ENST00000565511 ATP1A1-AS1Q5TC04 95 aa23.3■■□□□ 1.32
RAB40C-209ENST00000565511 DDHD1Q8NEL9 900 aa23.3■■□□□ 1.32
RAB40C-209ENST00000565511 RBM41Q96IZ5 413 aaKnown RBP23.3■■□□□ 1.32
RAB40C-209ENST00000565511 APOL2Q9BQE5 337 aa23.3■■□□□ 1.32
RAB40C-209ENST00000565511 GBA3Q9H227 469 aa23.3■■□□□ 1.32
RAB40C-209ENST00000565511 MRPS18BQ9Y676 258 aaKnown RBP23.3■■□□□ 1.32
RAB40C-209ENST00000565511 OR2AG2A6NM03 316 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 H7C0C1 242 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 APOC4-APOC2K7ER74 178 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 POLR1CO15160 346 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-209ENST00000565511 APOC2P02655 101 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 AMD1P17707 334 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 IDSP22304 550 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 F8A1P23610 371 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 CTNNA1P35221 906 aaKnown RBP23.29■■□□□ 1.32
RAB40C-209ENST00000565511 ATP5OP48047 213 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 NFE2L1Q14494 772 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 DAAM2Q86T65 1068 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 BEND7Q8N7W2 519 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-209ENST00000565511 ACTL9Q8TC94 416 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 DTX3LQ8TDB6 740 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 SLC45A3Q96JT2 553 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 VAT1Q99536 393 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 GPN2Q9H9Y4 310 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-209ENST00000565511 GEMIN8Q9NWZ8 242 aaKnown RBP23.29■■□□□ 1.32
RAB40C-209ENST00000565511 HACD3Q9P035 362 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 PSMD13Q9UNM6 376 aa23.29■■□□□ 1.32
RAB40C-209ENST00000565511 POP7O75817 140 aaKnown RBP23.28■■□□□ 1.32
RAB40C-209ENST00000565511 PRKAR1AP10644 381 aa23.28■■□□□ 1.32
RAB40C-209ENST00000565511 OAS2P29728 719 aaKnown RBP23.28■■□□□ 1.32
RAB40C-209ENST00000565511 PBLDP30039 288 aaPredicted RBP23.28■■□□□ 1.32
RAB40C-209ENST00000565511 ADRA1AP35348 466 aa23.28■■□□□ 1.32
RAB40C-209ENST00000565511 OTUD4Q01804 1114 aaKnown RBP23.28■■□□□ 1.32
RAB40C-209ENST00000565511 FOXM1Q08050 763 aa23.28■■□□□ 1.32
RAB40C-209ENST00000565511 DMPKQ09013 629 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms