RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 A0A0G2JNG1 304 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 C9orf172C9J069 976 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 K7ENP7 123 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 KIR2DS3K7RE56 304 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 CCL22O00626 93 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 ARHGAP6O43182 974 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 ZW10O43264 779 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 PRAMEF10O60809 474 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 PRAMEF1O95521 474 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 LPOP22079 712 aaPredicted RBP12.48□□□□□ -0.41
HERC2-206ENST00000564519 RPL10P27635 214 aaKnown RBP12.48□□□□□ -0.41
HERC2-206ENST00000564519 MAPK9P45984 424 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 DRG2P55039 364 aaKnown RBP12.48□□□□□ -0.41
HERC2-206ENST00000564519 GPLD1P80108 840 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 TMPRSS15P98073 1019 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 XIAPP98170 497 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 GTF2H3Q13889 308 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 KIR2DS5Q14953 304 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 TGIF1Q15583 401 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 KIAA1614Q5VZ46 1190 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 KCTD11Q693B1 232 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 TMEM71Q6P5X7 295 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 INO80CQ6PI98 192 aaPredicted RBP12.48□□□□□ -0.41
HERC2-206ENST00000564519 ARHGEF18Q6ZSZ5 1173 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 PRICKLE2Q7Z3G6 844 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 SLC9B2Q86UD5 537 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 DDHD1Q8NEL9 900 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 OR4D9Q8NGE8 314 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 ZNF398Q8TD17 642 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 TTC9Q92623 222 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 ARHGAP9Q9BRR9 750 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 TSGA10Q9BZW7 698 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 FAM117AQ9C073 453 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 PIH1D1Q9NWS0 290 aaKnown RBP12.48□□□□□ -0.41
HERC2-206ENST00000564519 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.48□□□□□ -0.41
HERC2-206ENST00000564519 WDR37Q9Y2I8 494 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 SSUH2Q9Y2M2 353 aa12.48□□□□□ -0.41
HERC2-206ENST00000564519 OR2AG2A6NM03 316 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 OR5K4A6NMS3 321 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 OR52A4PA6NMU1 304 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 C2orf81A6NN90 581 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 PDZK1P1A8MUH7 402 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 DUX1O43812 170 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 PPFIA2O75334 1257 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 POP7O75817 140 aaKnown RBP12.47□□□□□ -0.41
HERC2-206ENST00000564519 SRP72O76094 671 aaKnown RBP12.47□□□□□ -0.41
HERC2-206ENST00000564519 FGF3P11487 239 aaPredicted RBP12.47□□□□□ -0.41
HERC2-206ENST00000564519 TPH1P17752 444 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 SLC19A1P41440 591 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 PPM1FP49593 454 aaPredicted RBP12.47□□□□□ -0.41
HERC2-206ENST00000564519 ARSDP51689 593 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 ZNF140P52738 457 aaPredicted RBP12.47□□□□□ -0.41
HERC2-206ENST00000564519 SRSF6Q13247 344 aaKnown RBP12.47□□□□□ -0.41
HERC2-206ENST00000564519 ITGA9Q13797 1035 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 CLCA4Q14CN2 919 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 PARP6Q2NL67 630 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 SNAP47Q5SQN1 464 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 LDLRAP1Q5SW96 308 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 TMEM220Q6QAJ8 160 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 FAM83HQ6ZRV2 1179 aaPredicted RBP12.47□□□□□ -0.41
HERC2-206ENST00000564519 DET1Q7L5Y6 550 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 PRUNE1Q86TP1 453 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 ZFAND4Q86XD8 727 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 SLC13A5Q86YT5 568 aaPredicted RBP12.47□□□□□ -0.41
HERC2-206ENST00000564519 BEND7Q8N7W2 519 aaPredicted RBP12.47□□□□□ -0.41
HERC2-206ENST00000564519 OR10G6Q8NH81 332 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 BRSK1Q8TDC3 778 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 SNRNP27Q8WVK2 155 aaKnown RBP12.47□□□□□ -0.41
HERC2-206ENST00000564519 C1orf54Q8WWF1 131 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 TMEM159Q96B96 161 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 AHCYL2Q96HN2 611 aaKnown RBP12.47□□□□□ -0.41
HERC2-206ENST00000564519 CCNL2Q96S94 520 aaPredicted RBP12.47□□□□□ -0.41
HERC2-206ENST00000564519 SEMA4CQ9C0C4 833 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 ZMYND15Q9H091 742 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 FAM96AQ9H5X1 160 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 STN1Q9H668 368 aaKnown RBP12.47□□□□□ -0.41
HERC2-206ENST00000564519 ASB8Q9H765 288 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 ARNT2Q9HBZ2 717 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 LZTFL1Q9NQ48 299 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 SMOXQ9NWM0 555 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 OCIAD1Q9NX40 245 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 OGFRQ9NZT2 677 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 PDP2Q9P2J9 529 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 SLC30A1Q9Y6M5 507 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 SCN8AQ9UQD0 1980 aa12.47□□□□□ -0.41
HERC2-206ENST00000564519 KIF26BQ2KJY2 2108 aa12.46□□□□□ -0.41
HERC2-206ENST00000564519 ARHGEF17Q96PE2 2063 aaPredicted RBP12.46□□□□□ -0.41
HERC2-206ENST00000564519 A8MU76 341 aa12.46□□□□□ -0.41
HERC2-206ENST00000564519 HGSO14964 777 aaPredicted RBP12.46□□□□□ -0.41
HERC2-206ENST00000564519 NVLO15381 856 aaKnown RBP12.46□□□□□ -0.41
HERC2-206ENST00000564519 LDB2O43679 373 aa12.46□□□□□ -0.41
HERC2-206ENST00000564519 LIASO43766 372 aa12.46□□□□□ -0.41
HERC2-206ENST00000564519 KRT86O43790 486 aa12.46□□□□□ -0.41
HERC2-206ENST00000564519 SLC2A4P14672 509 aa12.46□□□□□ -0.41
HERC2-206ENST00000564519 ETS1P14921 441 aa12.46□□□□□ -0.41
HERC2-206ENST00000564519 XRCC1P18887 633 aaPredicted RBP12.46□□□□□ -0.41
HERC2-206ENST00000564519 CCZ1BP86790 482 aa12.46□□□□□ -0.41
HERC2-206ENST00000564519 CCZ1P86791 482 aaPredicted RBP12.46□□□□□ -0.41
HERC2-206ENST00000564519 TRA2AQ13595 282 aaKnown RBP eCLIP12.46□□□□□ -0.41
HERC2-206ENST00000564519 OASLQ15646 514 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms