RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 DNAJC1Q96KC8 554 aaKnown RBP30.25■■■□□ 2.43
CMTM4-204ENST00000563952 FAM96AQ9H5X1 160 aa30.25■■■□□ 2.43
CMTM4-204ENST00000563952 ETNK1Q9HBU6 452 aa30.25■■■□□ 2.43
CMTM4-204ENST00000563952 CRLS1Q9UJA2 301 aa30.25■■■□□ 2.43
CMTM4-204ENST00000563952 DSPP15924 2871 aaKnown RBP30.25■■■□□ 2.43
CMTM4-204ENST00000563952 IGHV5-10-1A0A0J9YXX1 117 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 CEP104O60308 925 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 ITGA2BP08514 1039 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 MPSTP25325 297 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 CXCR5P32302 372 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 HADHAP40939 763 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 MAPK9P45984 424 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 DRG2P55039 364 aaKnown RBP30.24■■■□□ 2.43
CMTM4-204ENST00000563952 LINC00523Q86TU6 105 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 JAMLQ86YT9 394 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 TRIM48Q8IWZ4 208 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 AVL9Q8NBF6 648 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 RCBTB1Q8NDN9 531 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 CCDC74BQ96LY2 380 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 CMKLR1Q99788 373 aa30.24■■■□□ 2.43
CMTM4-204ENST00000563952 PRR19A6NJB7 356 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 CDRT15L2A8MXV6 281 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 E7EVH7 732 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 DUX1O43812 170 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 POP7O75817 140 aaKnown RBP30.23■■■□□ 2.43
CMTM4-204ENST00000563952 PBLDP30039 288 aaPredicted RBP30.23■■■□□ 2.43
CMTM4-204ENST00000563952 FDFT1P37268 417 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 MLLT3P42568 568 aaPredicted RBP30.23■■■□□ 2.43
CMTM4-204ENST00000563952 CFHR1Q03591 330 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 C16orf72Q14CZ0 275 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 CCNG2Q16589 344 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 LONRF2Q1L5Z9 754 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 FNBP1LQ5T0N5 605 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 AMZ2Q86W34 360 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 OR52K1Q8NGK4 314 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 NAT14Q8WUY8 206 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 TMEM159Q96B96 161 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 TMEM9Q9P0T7 183 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 CELSR3Q9NYQ7 3312 aa30.23■■■□□ 2.43
CMTM4-204ENST00000563952 BPTFQ12830 3046 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 ITIH1P19827 911 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 ITGALP20701 1170 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 LIMK2P53671 638 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 UBE2IP63279 158 aaKnown RBP30.22■■■□□ 2.43
CMTM4-204ENST00000563952 SQSTM1Q13501 440 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 DNAAF3Q8N9W5 541 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 OR4D9Q8NGE8 314 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 MAIP1Q8WWC4 291 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 KCNE4Q8WWG9 221 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 ULK4Q96C45 1275 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 SGF29Q96ES7 293 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 CRELD1Q96HD1 420 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 LDHAL6BQ9BYZ2 381 aaPredicted RBP30.22■■■□□ 2.43
CMTM4-204ENST00000563952 RAB6BQ9NRW1 208 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 AKAP7Q9P0M2 348 aaPredicted RBP30.22■■■□□ 2.43
CMTM4-204ENST00000563952 ZNF624Q9P2J8 865 aaPredicted RBP30.22■■■□□ 2.43
CMTM4-204ENST00000563952 SLC30A1Q9Y6M5 507 aa30.22■■■□□ 2.43
CMTM4-204ENST00000563952 CCDC78A2IDD5 438 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 ERI2A8K979 691 aaKnown RBP30.21■■■□□ 2.43
CMTM4-204ENST00000563952 VIPP01282 170 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 BRAFP15056 766 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 XRCC1P18887 633 aaPredicted RBP30.21■■■□□ 2.43
CMTM4-204ENST00000563952 MC4RP32245 332 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 ABRAXAS1Q6UWZ7 409 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 PPP1R21Q6ZMI0 780 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 MICALCLQ6ZW33 695 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 SNX20Q7Z614 316 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 CLEC14AQ86T13 490 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 SPACA3Q8IXA5 215 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 BEND7Q8N7W2 519 aaPredicted RBP30.21■■■□□ 2.43
CMTM4-204ENST00000563952 GLIS1Q8NBF1 620 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 DCUN1D1Q96GG9 259 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 DPYSL5Q9BPU6 564 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 C19orf43Q9BQ61 176 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 TBC1D10AQ9BXI6 508 aa30.21■■■□□ 2.43
CMTM4-204ENST00000563952 NLE1Q9NVX2 485 aaPredicted RBP30.21■■■□□ 2.43
CMTM4-204ENST00000563952 OR52A4PA6NMU1 304 aa30.2■■■□□ 2.43
CMTM4-204ENST00000563952 KCNJ13O60928 360 aa30.2■■■□□ 2.43
CMTM4-204ENST00000563952 ZSCAN5DPP0CG00 497 aa30.2■■■□□ 2.43
CMTM4-204ENST00000563952 SLC19A1P41440 591 aa30.2■■■□□ 2.43
CMTM4-204ENST00000563952 MAPK10P53779 464 aa30.2■■■□□ 2.43
CMTM4-204ENST00000563952 ZRANB3Q5FWF4 1079 aa30.2■■■□□ 2.43
CMTM4-204ENST00000563952 AGAP9Q5VTM2 703 aa30.2■■■□□ 2.43
CMTM4-204ENST00000563952 TMEM71Q6P5X7 295 aa30.2■■■□□ 2.43
CMTM4-204ENST00000563952 FAM83HQ6ZRV2 1179 aaPredicted RBP30.2■■■□□ 2.43
CMTM4-204ENST00000563952 NXPE1Q8N323 547 aa30.2■■■□□ 2.43
CMTM4-204ENST00000563952 NCSTNQ92542 709 aa30.2■■■□□ 2.43
CMTM4-204ENST00000563952 ZNF514Q96K75 400 aaPredicted RBP30.2■■■□□ 2.43
CMTM4-204ENST00000563952 PAK5Q9P286 719 aa30.2■■■□□ 2.43
CMTM4-204ENST00000563952 ZKSCAN5Q9Y2L8 839 aa30.2■■■□□ 2.43
CMTM4-204ENST00000563952 DNMT3AQ9Y6K1 912 aaPredicted RBP30.2■■■□□ 2.43
CMTM4-204ENST00000563952 GAS8O95995 478 aa30.19■■■□□ 2.42
CMTM4-204ENST00000563952 SLC5A2P31639 672 aa30.19■■■□□ 2.42
CMTM4-204ENST00000563952 ETV5P41161 510 aa30.19■■■□□ 2.42
CMTM4-204ENST00000563952 EPHA4P54764 986 aa30.19■■■□□ 2.42
CMTM4-204ENST00000563952 CDH17Q12864 832 aa30.19■■■□□ 2.42
CMTM4-204ENST00000563952 NFE2L1Q14494 772 aa30.19■■■□□ 2.42
CMTM4-204ENST00000563952 CCDC38Q502W7 563 aa30.19■■■□□ 2.42
CMTM4-204ENST00000563952 WASH2PQ6VEQ5 465 aa30.19■■■□□ 2.42
CMTM4-204ENST00000563952 GSTA5Q7RTV2 222 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms