RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 PPP1R14CQ8TAE6 165 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 TEKT4Q8WW24 435 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 NSMCE3Q96MG7 304 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 LLPHQ9BRT6 129 aaKnown RBP10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 OLFML3Q9NRN5 406 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 GPATCH2LQ9NWQ4 482 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 TBC1D7Q9P0N9 293 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 ACTL7AQ9Y615 435 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 LOC100653049A0A140TA62 436 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 TSPAN11A1L157 253 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 FIGNL2A6NMB9 653 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 RNF223E7ERA6 249 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 CNOT3O75175 753 aaKnown RBP10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 SNRNP200O75643 2136 aaKnown RBP10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 KRT34O76011 436 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 F10P00742 488 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 IGLV3-25P01717 112 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 HRGP04196 525 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 RPN1P04843 607 aaKnown RBP10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 EPXP11678 715 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 LCP1P13796 627 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 AP3M2P53677 418 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 MARSP56192 900 aaKnown RBP10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 NUP107P57740 925 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 FOXL2P58012 376 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 BST2Q10589 180 aaKnown RBP10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 PMPCAQ10713 525 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 EIF4EBP2Q13542 120 aaPredicted RBP10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 POLD3Q15054 466 aaPredicted RBP10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 ZFYVE27Q5T4F4 411 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 ERAP2Q6P179 960 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 TREML4Q6UXN2 200 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 ACAD11Q709F0 780 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 TMEM151BQ8IW70 566 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 RPRMLQ8N4K4 120 aa10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 NOL6Q9H6R4 1146 aaKnown RBP10.32□□□□□ -0.76
HDGFL3-204ENST00000563790 DYNC2H1Q8NCM8 4307 aaKnown RBP10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 STATHP02808 62 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 PRKCSHP14314 528 aaPredicted RBP10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 ADCY2Q08462 1091 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 RALGDSQ12967 914 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 SLC25A35Q3KQZ1 300 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 ZNF394Q53GI3 561 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 ALFQ53S48 1182 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 ZNF789Q5FWF6 425 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 C6orf52Q5T4I8 152 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 KIRREL2Q6UWL6 708 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 LIPIQ6XZB0 460 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 MCATQ8IVS2 390 aaKnown RBP10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 SLC4A11Q8NBS3 891 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 HCAR2Q8TDS4 363 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 CLEC4CQ8WTT0 213 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 PSMF1Q92530 271 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 FAM149B1Q96BN6 582 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 ZBED6CLQ96FA7 236 aaPredicted RBP10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 PLEKHG4BQ96PX9 1271 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 SPON2Q9BUD6 331 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 TP63Q9H3D4 680 aaPredicted RBP10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 GPN3Q9UHW5 284 aaPredicted RBP10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 ATP8A1Q9Y2Q0 1164 aa10.31□□□□□ -0.76
HDGFL3-204ENST00000563790 ASPDHA6ND91 283 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 SYT5O00445 386 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 ELFN1P0C7U0 828 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 GAP43P17677 238 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 XRCC1P18887 633 aaPredicted RBP10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 TACR1P25103 407 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 PTH2RP49190 550 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 CASP4P49662 377 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 CLDN10P78369 228 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 RAD51Q06609 339 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 GOLGA7BQ2TAP0 167 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 TUBB8Q3ZCM7 444 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 FKBP15Q5T1M5 1219 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 ATXN7L2Q5T6C5 722 aaPredicted RBP10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 DOK6Q6PKX4 331 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 ZNF783Q6ZMS7 281 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 GALNT13Q8IUC8 556 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 LGI4Q8N135 537 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 MEIOBQ8N635 442 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 RAD54LQ92698 747 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 ARHGEF2Q92974 986 aaKnown RBP10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 SLC2A13Q96QE2 648 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 FGFBP2Q9BYJ0 223 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 SLC6A16Q9GZN6 736 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 ATP13A1Q9HD20 1204 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 LIMCH1Q9UPQ0 1083 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 MFHAS1Q9Y4C4 1052 aa10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 EPN1Q9Y6I3 576 aaPredicted RBP10.3□□□□□ -0.76
HDGFL3-204ENST00000563790 ILVBLA1L0T0 632 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 TMPRSS2O15393 492 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 USP1O94782 785 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 LCA5LO95447 670 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 WDPCPO95876 746 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 SLC2A3P11169 496 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 SRD5A1P18405 259 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 CYP2A7P20853 494 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 PTGS2P35354 604 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 ZFP36L2P47974 494 aaKnown RBP10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 TAP2Q03519 686 aa10.29□□□□□ -0.76
HDGFL3-204ENST00000563790 TMTC4Q5T4D3 741 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms