RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 WDFY2Q96P53 400 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 ATOH8Q96SQ7 321 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 PDZD7Q9H5P4 517 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 POLR1BQ9H9Y6 1135 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 FGF22Q9HCT0 170 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 SIX2Q9NPC8 291 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 MTMR10Q9NXD2 777 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 PDP2Q9P2J9 529 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 FBXW11Q9UKB1 542 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 KCNJ14Q9UNX9 436 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 R3HDM2Q9Y2K5 976 aaKnown RBP3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 MRPS28Q9Y2Q9 187 aaKnown RBP3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 TMEM184BQ9Y519 407 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 SMAD5-AS1Q9Y6J3 95 aa3.01□□□□□ -1.93
HMGB1P33-201ENST00000563485 MAGEB17A8MXT2 336 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 PLOD2O00469 737 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 MAP2K7O14733 419 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 IPO7O95373 1038 aaKnown RBP3□□□□□ -1.93
HMGB1P33-201ENST00000563485 BMP10O95393 424 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 SPARCP09486 303 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 CEACAM1P13688 526 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 HRH2P25021 359 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 MMP15P51511 669 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 CTSCP53634 463 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 TAS2R40P59535 323 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 SOWAHCQ53LP3 525 aaPredicted RBP3□□□□□ -1.93
HMGB1P33-201ENST00000563485 FFAR4Q5NUL3 377 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 NDUFAF5Q5TEU4 345 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 CYP20A1Q6UW02 462 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 R3HCC1LQ7Z5L2 792 aaKnown RBP3□□□□□ -1.93
HMGB1P33-201ENST00000563485 GTSCR1Q86UQ5 136 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 GCSAMQ8N6F7 178 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 TSPYL6Q8N831 410 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 DDHD1Q8NEL9 900 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 OR8K5Q8NH50 307 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 SEPT5Q99719 369 aaPredicted RBP3□□□□□ -1.93
HMGB1P33-201ENST00000563485 OPRPNQ99935 248 aaPredicted RBP3□□□□□ -1.93
HMGB1P33-201ENST00000563485 TMEM39BQ9GZU3 492 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 ERVMER34-1Q9H9K5 563 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 EPB41L5Q9HCM4 733 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 RASAL2Q9UJF2 1139 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 PYGO1Q9Y3Y4 419 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 PRSS21Q9Y6M0 314 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 RNF215Q9Y6U7 377 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 DISP3Q9P2K9 1392 aa3□□□□□ -1.93
HMGB1P33-201ENST00000563485 STK36Q9NRP7 1315 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 A0A1W2PPH5 198 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 ARHGEF9O43307 516 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 ZNF217O75362 1048 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 ADIPOQQ15848 244 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 STXBP4Q6ZWJ1 553 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 PTOV1Q86YD1 416 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 ZNF843Q8N446 348 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 KCNG4Q8TDN1 519 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 ZNF689Q96CS4 500 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 GFI1Q99684 422 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 EGFL8Q99944 293 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 PYGO2Q9BRQ0 406 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 PREBQ9HCU5 417 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 UBN1Q9NPG3 1134 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 YIPF1Q9Y548 306 aa2.99□□□□□ -1.93
HMGB1P33-201ENST00000563485 ARHGEF40Q8TER5 1519 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 TEX13DA0A0J9YY54 714 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 FAM237BA0A1B0GVD1 139 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 C15orf62A8K5M9 175 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 TCERG1O14776 1098 aaKnown RBP2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 HCRTR2O43614 444 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 NDUFS3O75489 264 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 GCNT3O95395 438 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 NADKO95544 446 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 SELLP14151 372 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 LIFP15018 202 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 EPHA2P29317 976 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 CASP6P55212 293 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 LMO4P61968 165 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 TUBB2AQ13885 445 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 ZRSR2Q15696 482 aaKnown RBP2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 NAB2Q15742 525 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 RNF168Q8IYW5 571 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 OR2T12Q8NG77 320 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 SMPDL3BQ92485 455 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 SGCDQ92629 289 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 ZKSCAN4Q969J2 545 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 POM121L2Q96KW2 1035 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 LINC00479Q96M42 142 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 RHNO1Q9BSD3 238 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 TUBB2BQ9BVA1 445 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 CDK19Q9BWU1 502 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 WDR13Q9H1Z4 485 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 SEMA6AQ9H2E6 1030 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 PELI2Q9HAT8 420 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 RCC2Q9P258 522 aaKnown RBP2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 PAK5Q9P286 719 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 TMEM181Q9P2C4 612 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 KCNE2Q9Y6J6 123 aa2.98□□□□□ -1.93
HMGB1P33-201ENST00000563485 A0A0J9YWU9 116 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 OR2M5A3KFT3 312 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 TMEM189-UBE2V1I3L0A0 370 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 SH2B2O14492 632 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms