RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 ASCL3Q9NQ33 180 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 KCNK4Q9NYG8 393 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 CPNE7Q9UBL6 633 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 CRLS1Q9UJA2 301 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 OR5K4A6NMS3 321 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 USP27XA6NNY8 438 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 APRTP07741 180 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 BRAFP15056 766 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 ITGALP20701 1170 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 RPL10P27635 214 aaKnown RBP27.82■■■□□ 2.04
NME3-203ENST00000563367 UBE2IP63279 158 aaKnown RBP27.82■■■□□ 2.04
NME3-203ENST00000563367 FNBP1LQ5T0N5 605 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 FOXR1Q6PIV2 292 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 PPP1R21Q6ZMI0 780 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 GSTA5Q7RTV2 222 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 PIM3Q86V86 326 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 AMZ2Q86W34 360 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 NXPE1Q8N323 547 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 BEND7Q8N7W2 519 aaPredicted RBP27.82■■■□□ 2.04
NME3-203ENST00000563367 CDKN2AIPNLQ96HQ2 116 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 SLC38A3Q99624 504 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 STRADBQ9C0K7 418 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 CASS4Q9NQ75 786 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 HOMER3Q9NSC5 361 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 ZNF624Q9P2J8 865 aaPredicted RBP27.82■■■□□ 2.04
NME3-203ENST00000563367 PCDHGA8Q9Y5G5 932 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 ADAMTS20P59510 1910 aa27.82■■■□□ 2.04
NME3-203ENST00000563367 ZFHX4Q86UP3 3567 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 PDZK1P1A8MUH7 402 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 TMX2-CTNND1H3BSU7 103 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 H7C0S8 307 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 ZW10O43264 779 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 SGTAO43765 313 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 PRSS56P0CW18 603 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 HOXB3P14651 431 aaPredicted RBP27.81■■■□□ 2.04
NME3-203ENST00000563367 PSMA3P25788 255 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 CSF2RBP32927 897 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 DRG2P55039 364 aaKnown RBP27.81■■■□□ 2.04
NME3-203ENST00000563367 ABRAXAS1Q6UWZ7 409 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 FAM83HQ6ZRV2 1179 aaPredicted RBP27.81■■■□□ 2.04
NME3-203ENST00000563367 LSMEM2Q8N112 164 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 COG1Q8WTW3 980 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 FGF11Q92914 225 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 SLC46A1Q96NT5 459 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 SMARCAL1Q9NZC9 954 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 WDR37Q9Y2I8 494 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 SLC30A1Q9Y6M5 507 aa27.81■■■□□ 2.04
NME3-203ENST00000563367 AGRPO00253 132 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 XRCC1P18887 633 aaPredicted RBP27.8■■■□□ 2.04
NME3-203ENST00000563367 IDSP22304 550 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 SLC19A1P41440 591 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 ARSDP51689 593 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 DMPKQ09013 629 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 SQSTM1Q13501 440 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 AGAP9Q5VTM2 703 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 TTC27Q6P3X3 843 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 IGF2-ASQ6U949 168 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 WASH2PQ6VEQ5 465 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 RAB11FIP2Q7L804 512 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 SNIP1Q8TAD8 396 aaKnown RBP27.8■■■□□ 2.04
NME3-203ENST00000563367 ULK4Q96C45 1275 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 AP1M1Q9BXS5 423 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 WASH6PQ9NQA3 447 aa27.8■■■□□ 2.04
NME3-203ENST00000563367 TTC7AQ9ULT0 858 aaPredicted RBP27.8■■■□□ 2.04
NME3-203ENST00000563367 DNMT3AQ9Y6K1 912 aaPredicted RBP27.8■■■□□ 2.04
NME3-203ENST00000563367 CFAP47Q6ZTR5 3102 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 TRBV5-4A0A0C4DH59 114 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 KCNJ13O60928 360 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 HGFP14210 728 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 VCLP18206 1134 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 PBLDP30039 288 aaPredicted RBP27.79■■■□□ 2.04
NME3-203ENST00000563367 NFE2L1Q14494 772 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 CLCA4Q14CN2 919 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 CLPPQ16740 277 aaPredicted RBP27.79■■■□□ 2.04
NME3-203ENST00000563367 GPR33Q49SQ1 333 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 ZRANB3Q5FWF4 1079 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 PHF19Q5T6S3 580 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 C4orf22Q6V702 233 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 FBXO39Q8N4B4 442 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 ZNF578Q96N58 590 aaPredicted RBP27.79■■■□□ 2.04
NME3-203ENST00000563367 DCBLD2Q96PD2 775 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 OSBPL9Q96SU4 736 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 STN1Q9H668 368 aaKnown RBP27.79■■■□□ 2.04
NME3-203ENST00000563367 TMEM9Q9P0T7 183 aa27.79■■■□□ 2.04
NME3-203ENST00000563367 PRAMEF33A0A0G2JMD5 474 aa27.78■■■□□ 2.04
NME3-203ENST00000563367 IGHV5-10-1A0A0J9YXX1 117 aa27.78■■■□□ 2.04
NME3-203ENST00000563367 PLD2O14939 933 aa27.78■■■□□ 2.04
NME3-203ENST00000563367 KIF5CO60282 957 aa27.78■■■□□ 2.04
NME3-203ENST00000563367 EIF2S3P41091 472 aaKnown RBP27.78■■■□□ 2.04
NME3-203ENST00000563367 GPLD1P80108 840 aa27.78■■■□□ 2.04
NME3-203ENST00000563367 BASP1P80723 227 aaKnown RBP27.78■■■□□ 2.04
NME3-203ENST00000563367 PIANPQ8IYJ0 282 aa27.78■■■□□ 2.04
NME3-203ENST00000563367 SH3KBP1Q96B97 665 aa27.78■■■□□ 2.04
NME3-203ENST00000563367 DCUN1D1Q96GG9 259 aa27.78■■■□□ 2.04
NME3-203ENST00000563367 ZNF514Q96K75 400 aaPredicted RBP27.78■■■□□ 2.04
NME3-203ENST00000563367 COPS8Q99627 209 aa27.78■■■□□ 2.04
NME3-203ENST00000563367 TBC1D10AQ9BXI6 508 aa27.78■■■□□ 2.04
NME3-203ENST00000563367 EIF2B3Q9NR50 452 aaKnown RBP27.78■■■□□ 2.04
NME3-203ENST00000563367 A0A087WV48 116 aa27.77■■■□□ 2.04
NME3-203ENST00000563367 OR51F1A6NGY5 319 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms