RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CFLARO15519 480 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 ATP13A5Q4VNC0 1218 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 TCEAL5Q5H9L2 206 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 LRRC74BQ6ZQY2 392 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 KIAA0907Q7Z7F0 614 aaPredicted RBP18.88■□□□□ 0.61
SMPD3-203ENST00000563226 ADGRD2Q7Z7M1 963 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 C12orf76Q8N812 135 aaPredicted RBP18.88■□□□□ 0.61
SMPD3-203ENST00000563226 DCBLD1Q8N8Z6 715 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 LEMD2Q8NC56 503 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 HIPK4Q8NE63 616 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 PYDC1Q8WXC3 89 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 ZNF641Q96N77 438 aaPredicted RBP18.88■□□□□ 0.61
SMPD3-203ENST00000563226 CDRT15Q96T59 188 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 TTC1Q99614 292 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 HGH1Q9BTY7 390 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 WDR41Q9HAD4 459 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 EFCAB1Q9HAE3 211 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 ADAMTS6Q9UKP5 1117 aa18.88■□□□□ 0.61
SMPD3-203ENST00000563226 FBP2O00757 339 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 ANPEPP15144 967 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 THOP1P52888 689 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 PKNOX1P55347 436 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 B4GALNT1Q00973 533 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 RBBP7Q16576 425 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 GPR33Q49SQ1 333 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 TRIM68Q6AZZ1 485 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 PAOXQ6QHF9 649 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 GDPD4Q6W3E5 623 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 BNC2Q6ZN30 1099 aaPredicted RBP18.87■□□□□ 0.61
SMPD3-203ENST00000563226 PGAM4Q8N0Y7 254 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 FRS2Q8WU20 508 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 RSPRY1Q96DX4 576 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 NMRK1Q9NWW6 199 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 NUDT4Q9NZJ9 180 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 MARK1Q9P0L2 795 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 POLG2Q9UHN1 485 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 CD84Q9UIB8 345 aa18.87■□□□□ 0.61
SMPD3-203ENST00000563226 PRPF19Q9UMS4 504 aaKnown RBP18.87■□□□□ 0.61
SMPD3-203ENST00000563226 MRPS23Q9Y3D9 190 aaKnown RBP18.87■□□□□ 0.61
SMPD3-203ENST00000563226 NUP210Q8TEM1 1887 aaPredicted RBP18.87■□□□□ 0.61
SMPD3-203ENST00000563226 POLR2EP19388 210 aaKnown RBP18.86■□□□□ 0.61
SMPD3-203ENST00000563226 GCKP35557 465 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 ART3Q13508 389 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 DMC1Q14565 340 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 GPRC6AQ5T6X5 926 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 LYPLAL1Q5VWZ2 237 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 MACC1Q6ZN28 852 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 FRA10AC1Q70Z53 315 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 AHI1Q8N157 1196 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 PBXIP1Q96AQ6 731 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 HTATIP2Q9BUP3 242 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 WASH3PC4AMC7 463 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 CRCPO75575 148 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 CA3P07451 260 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 MSX2P35548 267 aaPredicted RBP18.86■□□□□ 0.61
SMPD3-203ENST00000563226 VHLP40337 213 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 NME5P56597 212 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 CEACAM7Q14002 265 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 ZRSR2Q15696 482 aaKnown RBP18.86■□□□□ 0.61
SMPD3-203ENST00000563226 PIGGQ5H8A4 983 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 REP15Q6BDI9 236 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 SCIMPQ6UWF3 145 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 ADAMTSL2Q86TH1 951 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 ZBTB2Q8N680 514 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 RNF148Q8N7C7 305 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 OR52B6Q8NGF0 335 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 CDK15Q96Q40 435 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 S100A14Q9HCY8 104 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 MBD1Q9UIS9 605 aaPredicted RBP18.86■□□□□ 0.61
SMPD3-203ENST00000563226 TMPRSS11EQ9UL52 423 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 LRRC42Q9Y546 428 aa18.86■□□□□ 0.61
SMPD3-203ENST00000563226 RANBP2P49792 3224 aaKnown RBP18.86■□□□□ 0.61
SMPD3-203ENST00000563226 SOBPA7XYQ1 873 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 ESRRBO95718 433 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 GPX3P22352 226 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 GTF2A1P52655 376 aaPredicted RBP18.85■□□□□ 0.61
SMPD3-203ENST00000563226 AP2B1P63010 937 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 DHCR24Q15392 516 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 TAF11Q15544 211 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 ZNF423Q2M1K9 1284 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 RNF111Q6ZNA4 994 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 C12orf40Q86WS4 652 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 FUNDC1Q8IVP5 155 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 SLC26A7Q8TE54 656 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 DLG3Q92796 817 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 TUBGCP3Q96CW5 907 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 SLC45A3Q96JT2 553 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 ACOX2Q99424 681 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 ELOVL2Q9NXB9 296 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 ZDHHC7Q9NXF8 308 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 TMCO1Q9UM00 188 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 C2orf16Q68DN1 1984 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 FFAR2O15552 330 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 LEFTY1O75610 366 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 OR4F21O95013 312 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 MLYCDO95822 493 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 GUCA1CO95843 209 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 CYP17A1P05093 508 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 CTSLP07711 333 aa18.85■□□□□ 0.61
SMPD3-203ENST00000563226 TCF3P15923 654 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms