RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PADI1Q9ULC6 663 aa12.76□□□□□ -0.37
SF3B3-202ENST00000562722 A0A0A6YYK5 440 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-202ENST00000562722 SYCE3A1L190 88 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 SPAG6O75602 509 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 RFPL1O75677 317 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 NDST3O95803 873 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 MT-CYBP00156 380 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-202ENST00000562722 MT-ND3P03897 115 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 FGF5P12034 268 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 BRAFP15056 766 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 ZFXP17010 805 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-202ENST00000562722 TUBB3Q13509 450 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 DNASE1L3Q13609 305 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 PLCL1Q15111 1095 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 SLC18A3Q16572 532 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 KHDC1Q4VXA5 237 aaKnown RBP12.75□□□□□ -0.37
SF3B3-202ENST00000562722 AGAP9Q5VTM2 703 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 SLC9A4Q6AI14 798 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 ABRAXAS1Q6UWZ7 409 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 ASB18Q6ZVZ8 466 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 TMEM135Q86UB9 458 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 ZNF547Q8IVP9 402 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 TTC30BQ8N4P2 665 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 SIDT2Q8NBJ9 832 aaKnown RBP12.75□□□□□ -0.37
SF3B3-202ENST00000562722 RNF25Q96BH1 459 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-202ENST00000562722 ANP32EQ9BTT0 268 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 ZCCHC2Q9C0B9 1178 aaKnown RBP12.75□□□□□ -0.37
SF3B3-202ENST00000562722 GLOD4Q9HC38 313 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 IFNKQ9P0W0 207 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 NENFQ9UMX5 172 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 MAN2B2Q9Y2E5 1009 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 SPO11Q9Y5K1 396 aa12.75□□□□□ -0.37
SF3B3-202ENST00000562722 AURKAO14965 403 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 MTSS1O43312 755 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 AKR1B10O60218 316 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 CREG1O75629 220 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 TPM3P06753 285 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 FURINP09958 794 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 TMEM253P0C7T8 217 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 NELFEP18615 380 aaKnown RBP12.74□□□□□ -0.37
SF3B3-202ENST00000562722 MLLT10P55197 1068 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 TMEM115Q12893 351 aaPredicted RBP12.74□□□□□ -0.37
SF3B3-202ENST00000562722 KCNAB1Q14722 419 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 PPP2R5EQ16537 467 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.74□□□□□ -0.37
SF3B3-202ENST00000562722 ATP13A5Q4VNC0 1218 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 KLHL35Q6PF15 583 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 WASH2PQ6VEQ5 465 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 FAM26EQ8N5C1 309 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 CT55Q8WUE5 264 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 KLHL6Q8WZ60 621 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 VPS35Q96QK1 796 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 WASH6PQ9NQA3 447 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 ZNHIT6Q9NWK9 470 aaKnown RBP12.74□□□□□ -0.37
SF3B3-202ENST00000562722 RARRES3Q9UL19 164 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 PSMD13Q9UNM6 376 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 WDR37Q9Y2I8 494 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.74□□□□□ -0.37
SF3B3-202ENST00000562722 PTPN13Q12923 2485 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 NAV2Q8IVL1 2488 aa12.74□□□□□ -0.37
SF3B3-202ENST00000562722 ZNF487B1APH4 448 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 F5H423 210 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-202ENST00000562722 K7EM74 188 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 TIAF1O95411 115 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 GP1BBP13224 206 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 PBLDP30039 288 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-202ENST00000562722 SPAM1P38567 509 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 PMS2P54278 862 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 PPP1CAP62136 330 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 NOMO1Q15155 1222 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 SLC14A2Q15849 920 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 TEX44Q53QW1 395 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 TCTN3Q6NUS6 607 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 FAM151BQ6UXP7 276 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 AMZ2Q86W34 360 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 SLC25A41Q8N5S1 370 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 SLC35G2Q8TBE7 412 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 BRSK1Q8TDC3 778 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 UBXN4Q92575 508 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 OLFM3Q96PB7 478 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 XPO4Q9C0E2 1151 aaKnown RBP12.73□□□□□ -0.37
SF3B3-202ENST00000562722 ACTL8Q9H568 366 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 LHX9Q9NQ69 397 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 IMP3Q9NV31 184 aaKnown RBP12.73□□□□□ -0.37
SF3B3-202ENST00000562722 EPHA6Q9UF33 1036 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 TLK1Q9UKI8 766 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 TMPRSS11EQ9UL52 423 aa12.73□□□□□ -0.37
SF3B3-202ENST00000562722 IGHV5-51A0A0C4DH38 117 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 UBA6A0AVT1 1052 aaPredicted RBP12.72□□□□□ -0.37
SF3B3-202ENST00000562722 C3orf70A6NLC5 250 aaPredicted RBP12.72□□□□□ -0.37
SF3B3-202ENST00000562722 OR2AG2A6NM03 316 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 C21orf140B9A014 251 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 KCNJ13O60928 360 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 POP7O75817 140 aaKnown RBP12.72□□□□□ -0.37
SF3B3-202ENST00000562722 DNAJB5O75953 348 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 NTRK1P04629 796 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 EBLN1P0CF75 366 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 FOLR1P15328 257 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 FECHP22830 423 aa12.72□□□□□ -0.37
SF3B3-202ENST00000562722 PTPN3P26045 913 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms