RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 GRAMD4Q6IC98 578 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 BRAT1Q6PJG6 821 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 PAQR3Q6TCH7 311 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 CERS6Q6ZMG9 384 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 CCDC121Q6ZUS5 278 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 SNX20Q7Z614 316 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 TBC1D1Q86TI0 1168 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 SERPINA9Q86WD7 417 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 RYBPQ8N488 228 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 OTUD6BQ8N6M0 293 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 PLPP7Q8NBV4 271 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 ST13P5Q8NFI4 369 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 TTC8Q8TAM2 541 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 LKAAEAR1Q8TD35 194 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 CD200R1Q8TD46 325 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 DTX3LQ8TDB6 740 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 STON2Q8WXE9 905 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 ELSPBP1Q96BH3 223 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 PDLIM5Q96HC4 596 aaKnown RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 PRR11Q96HE9 360 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 LRIG1Q96JA1 1093 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 KLHL32Q96NJ5 620 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 ATOH8Q96SQ7 321 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 FAM129BQ96TA1 746 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 TMEM120AQ9BXJ8 343 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 UNKQ9C0B0 810 aaKnown RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 DERL2Q9GZP9 239 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 TMEM245Q9H330 911 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 TFB2MQ9H5Q4 396 aaKnown RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 ZDHHC6Q9H6R6 413 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 PNPOQ9NVS9 261 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 NFKBIL1Q9UBC1 381 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 CD207Q9UJ71 328 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 SARDHQ9UL12 918 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 DNAJC16Q9Y2G8 782 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 PKP3Q9Y446 797 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 HRH3Q9Y5N1 445 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 PRSS21Q9Y6M0 314 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 COL4A2P08572 1712 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 C5orf42Q9H799 3197 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 GLYATL1P3A0A0U1RQE8 302 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 DYTNA2CJ06 578 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 CAPN14A8MX76 684 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 UPK3BL1B0FP48 263 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 UPK3BL2E5RIL1 263 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 PRMT5O14744 637 aaPredicted RBP6.46□□□□□ -1.38
CAPN3-210ENST00000561817 GRID2O43424 1007 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 SGTAO43765 313 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 KLK8O60259 260 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 NPHS1O60500 1241 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 ECI2O75521 394 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 DNAJC8O75937 253 aaPredicted RBP6.46□□□□□ -1.38
CAPN3-210ENST00000561817 RHOBTB1O94844 696 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 PRAMEF1O95521 474 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 ATP5BP06576 529 aaKnown RBP6.46□□□□□ -1.38
CAPN3-210ENST00000561817 CHRNGP07510 517 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 RBP1P09455 135 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 NEFHP12036 1026 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 LAMP2P13473 410 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 UGT1A6P19224 532 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 TFEBP19484 476 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 UGT1A1P22309 533 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 UGT1A4P22310 534 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 ACRV1P26436 265 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 PMLP29590 882 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 VIPR1P32241 457 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 GJA4P35212 333 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 UGT1A3P35503 534 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 UGT1A5P35504 534 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 SPAM1P38567 509 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 SPINT3P49223 89 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 IDH3AP50213 366 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 KPNA2P52292 529 aaKnown RBP6.46□□□□□ -1.38
CAPN3-210ENST00000561817 ARFIP2P53365 341 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 METAP1P53582 386 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 NAGLUP54802 743 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 SLC12A2P55011 1212 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 DCDC1P59894 354 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 B4GALNT1Q00973 533 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 RAD51Q06609 339 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 RUNX3Q13761 415 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 ENPP2Q13822 863 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 RCN2Q14257 317 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 EIF4HQ15056 248 aaKnown RBP6.46□□□□□ -1.38
CAPN3-210ENST00000561817 HNRNPA1L2Q32P51 320 aaKnown RBP6.46□□□□□ -1.38
CAPN3-210ENST00000561817 GPR33Q49SQ1 333 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 ACCSLQ4AC99 568 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 UNC50Q53HI1 259 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 ZNF805Q5CZA5 627 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 ARL13AQ5H913 290 aaPredicted RBP6.46□□□□□ -1.38
CAPN3-210ENST00000561817 AARS2Q5JTZ9 985 aaKnown RBP6.46□□□□□ -1.38
CAPN3-210ENST00000561817 C1QTNF12Q5T7M4 302 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 PARM1Q6UWI2 310 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 FAM151BQ6UXP7 276 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 MACC1Q6ZN28 852 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 USP45Q70EL2 814 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 DPPA4Q7L190 304 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 ASRGL1Q7L266 308 aa6.46□□□□□ -1.38
CAPN3-210ENST00000561817 PARS2Q7L3T8 475 aaKnown RBP6.46□□□□□ -1.38
CAPN3-210ENST00000561817 HSD11B1LQ7Z5J1 315 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms