RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, human

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-223	ENST00000560445	ARHGAP22	Q7Z5H3	698 aa		13.86	□□□□□ -0.19
TPM1-223	ENST00000560445	CACNA2D3	Q8IZS8	1091 aa		13.86	□□□□□ -0.19
TPM1-223	ENST00000560445	SLC25A41	Q8N5S1	370 aa		13.86	□□□□□ -0.19
TPM1-223	ENST00000560445	ULK4	Q96C45	1275 aa		13.86	□□□□□ -0.19
TPM1-223	ENST00000560445	MRGPRX2	Q96LB1	330 aa		13.86	□□□□□ -0.19
TPM1-223	ENST00000560445	CATSPER2	Q96P56	530 aa		13.86	□□□□□ -0.19
TPM1-223	ENST00000560445	HEMGN	Q9BXL5	484 aa		13.86	□□□□□ -0.19
TPM1-223	ENST00000560445	RBSN	Q9H1K0	784 aa		13.86	□□□□□ -0.19
TPM1-223	ENST00000560445	IL26	Q9NPH9	171 aa		13.86	□□□□□ -0.19
TPM1-223	ENST00000560445	PRDM8	Q9NQV8	689 aa		13.86	□□□□□ -0.19
TPM1-223	ENST00000560445	IL17C	Q9P0M4	197 aa		13.86	□□□□□ -0.19
TPM1-223	ENST00000560445	PCDHGA4	Q9Y5G9	962 aa		13.86	□□□□□ -0.19
TPM1-223	ENST00000560445	SPO11	Q9Y5K1	396 aa		13.86	□□□□□ -0.19
TPM1-223	ENST00000560445	MGA	Q8IWI9	3026 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	CFAP99	D6REC4	459 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	POLR1C	O15160	346 aa	Predicted RBP	13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	EML2	O95834	649 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	RBP3	P10745	1247 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	LPO	P22079	712 aa	Predicted RBP	13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	HADHA	P40939	763 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	EIF3E	P60228	445 aa	Known RBP	13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	TAF1A	Q15573	450 aa	Predicted RBP	13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	TGIF1	Q15583	401 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	PLA2G4E	Q3MJ16	856 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	KIAA1614	Q5VZ46	1190 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	ZNF449	Q6P9G9	518 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	FAM151B	Q6UXP7	276 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	ZNF761	Q86XN6	746 aa	Predicted RBP	13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	NLGN4X	Q8N0W4	816 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	ZNF843	Q8N446	348 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	TTC30B	Q8N4P2	665 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	ACTL9	Q8TC94	416 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	KRT35	Q92764	455 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	DCUN1D1	Q96GG9	259 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	SPATA13	Q96N96	652 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	BAG1	Q99933	345 aa	Predicted RBP	13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	GOLPH3	Q9H4A6	298 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	VPS37B	Q9H9H4	285 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	BPIFA1	Q9NP55	256 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	ARFGAP3	Q9NP61	516 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	IMPACT	Q9P2X3	320 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	AMFR	Q9UKV5	643 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	DNAJC16	Q9Y2G8	782 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	B3GALT1	Q9Y5Z6	326 aa		13.85	□□□□□ -0.19
TPM1-223	ENST00000560445	SOWAHD	A6NJG2	315 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	ZNF891	A8MT65	544 aa	Predicted RBP	13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	AGRP	O00253	132 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	KCNN4	O15554	427 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	RAD1	O60671	282 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	RASSF9	O75901	435 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	PRAMEF1	O95521	474 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	C9	P02748	559 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	MPST	P25325	297 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	RBL1	P28749	1068 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	CAPZB	P47756	277 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	MARCKSL1	P49006	195 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	OTUD4	Q01804	1114 aa	Known RBP	13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	MAP7	Q14244	749 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	IL11RA	Q14626	422 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	LLGL1	Q15334	1064 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	SEPT7	Q16181	437 aa	Known RBP	13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	P3H1	Q32P28	736 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	B4GALNT4	Q76KP1	1039 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	PEX26	Q7Z412	305 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	ESX1	Q8N693	406 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	ZFPM2	Q8WW38	1151 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	NKD1	Q969G9	470 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	C9orf72	Q96LT7	481 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	CD180	Q99467	661 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	FICD	Q9BVA6	458 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	RAB33B	Q9H082	229 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	ACSL5	Q9ULC5	683 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445	SPTA1	P02549	2419 aa		13.84	□□□□□ -0.19
TPM1-223	ENST00000560445		A8MU76	341 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445		F8W8V4	182 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	AURKA	O14965	403 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	PSMD3	O43242	534 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	MTX2	O75431	263 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	GAS8	O95995	478 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	PRB1	P04280	392 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	SLC35G4	P0C7Q5	338 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	ITGAL	P20701	1170 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	NDUFS1	P28331	727 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	UGT1A3	P35503	534 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	CHRNA4	P43681	627 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	ABHD18	Q0P651	414 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	LAMB3	Q13751	1172 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	CHRNA6	Q15825	494 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	ANKRD20A2	Q5SQ80	823 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	GPRC6A	Q5T6X5	926 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	ANKRD20A1	Q5TYW2	823 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	ANKRD20A3	Q5VUR7	823 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	ANKS6	Q68DC2	871 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	ARHGEF18	Q6ZSZ5	1173 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	PRSS42	Q7Z5A4	293 aa		13.83	□□□□□ -0.2
TPM1-223	ENST00000560445	VASH2	Q86V25	355 aa		13.83	□□□□□ -0.2

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