RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 IRF4Q15306 451 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 TMED2Q15363 201 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 TCEA2Q15560 299 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 MAP9Q49MG5 647 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 KHDC1Q4VXA5 237 aaKnown RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 HSP90AA5PQ58FG0 334 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 SPANXN3Q5MJ09 141 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 FAM46CQ5VWP2 391 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 ZNF470Q6ECI4 717 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 KIAA0930Q6ICG6 404 aaPredicted RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 LIPIQ6XZB0 460 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 TRMT10CQ7L0Y3 403 aaKnown RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 ARMCX6Q7L4S7 300 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 DSG4Q86SJ6 1040 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 TMEM135Q86UB9 458 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 CTAGE3PQ8IX95 158 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 MAML2Q8IZL2 1156 aaPredicted RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 SPEM1Q8N4L4 309 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 MREGQ8N565 214 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 PPM1NQ8N819 430 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 EIF1ADQ8N9N8 165 aaKnown RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 OR6P1Q8NGX9 317 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 GSDMBQ8TAX9 411 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 LKAAEAR1Q8TD35 194 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 BRSK1Q8TDC3 778 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 CXorf40AQ8TE69 158 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 DCAKDQ8WVC6 231 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 HNRNPLLQ8WVV9 542 aaKnown RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 CLDN23Q96B33 292 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 FAM136AQ96C01 138 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 NUS1Q96E22 293 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 MISP3Q96FF7 219 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 LRIG1Q96JA1 1093 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 COQ10AQ96MF6 247 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 RANBP9Q96S59 729 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 LYSMD1Q96S90 227 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 PAFAH2Q99487 392 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 NDNQ99608 321 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 RIOK2Q9BVS4 552 aaKnown RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 HDAC8Q9BY41 377 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 FUT8Q9BYC5 575 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 FAM129AQ9BZQ8 928 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 FOXP3Q9BZS1 431 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 C6orf106Q9H6K1 298 aaPredicted RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 EBF2Q9HAK2 575 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 MRM3Q9HC36 420 aaKnown RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 MAGEE1Q9HCI5 957 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 IL26Q9NPH9 171 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 MBNL1Q9NR56 388 aaKnown RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 NLE1Q9NVX2 485 aaPredicted RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 ARGLU1Q9NWB6 273 aaPredicted RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 USP36Q9P275 1121 aaKnown RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 TBK1Q9UHD2 729 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 ADGRE2Q9UHX3 823 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 MBD1Q9UIS9 605 aaPredicted RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 TMPRSS11EQ9UL52 423 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 PPIL1Q9Y3C6 166 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 PCYT1BQ9Y5K3 369 aaPredicted RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 NFS1Q9Y697 457 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 PRSS21Q9Y6M0 314 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 FAM169AQ9Y6X4 670 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 MYO15AQ9UKN7 3530 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 ATXN2Q99700 1313 aaKnown RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 ZDBF2Q9HCK1 2354 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 DNAH14Q0VDD8 3507 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 VPS13AQ96RL7 3174 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 A0A087WUV0 522 aaPredicted RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 TBC1D3DA0A087WVF3 549 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TBC1D3IA0A087WXS9 549 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TBC1D3EA0A087X179 549 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TBC1D3KA0A087X1G2 549 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 GLYATL1P3A0A0U1RQE8 302 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 EXOC1LA0A1B0GW35 172 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TLDC2A0PJX2 215 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TBC1D3FA6NER0 549 aaPredicted RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 C2orf81A6NN90 581 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 IQCF5A8MTL0 148 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TBC1D3LB9A6J9 549 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 DYNC1I1O14576 645 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 NDC80O14777 642 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 NPC1O15118 1278 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 SLC31A1O15431 190 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 FSBPO95073 299 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 APBB3O95704 486 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 CRTAMO95727 393 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TOP3BO95985 862 aaKnown RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 TBC1D3HP0C7X1 549 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 TDGF1P13385 188 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 ITGB6P18564 788 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 SAT1P21673 171 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 STX2P32856 288 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 IGFALSP35858 605 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 HMGCLP35914 325 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 SPAM1P38567 509 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 RPS9P46781 194 aaKnown RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 SPINT3P49223 89 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 CLDN2P57739 230 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 RPL26P61254 145 aaKnown RBP5.17□□□□□ -1.58
SPG11-220ENST00000559933 PRAMEP78395 509 aa5.17□□□□□ -1.58
SPG11-220ENST00000559933 CSTF1Q05048 431 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms