RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 APRTP07741 180 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 F3P13726 295 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 HGFP14210 728 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 RPL10P27635 214 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 NMBRP28336 390 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 ETV5P41161 510 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 VPS41P49754 854 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 DMPKQ09013 629 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 LRP8Q14114 963 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 DBN1Q16643 649 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 TSTD2Q5T7W7 516 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 CES3Q6UWW8 571 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 ABRAXAS1Q6UWZ7 409 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 USP53Q70EK8 1073 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 LDB1Q86U70 411 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 LRRTM4Q86VH4 590 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 SERPINA9Q86WD7 417 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 CCNJLQ8IV13 435 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 NXPE1Q8N323 547 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 CLDN19Q8N6F1 224 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 SPDYE1Q8NFV5 336 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 GPR150Q8NGU9 434 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 MAGOHBQ96A72 148 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 FCRL3Q96P31 734 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 RANBP9Q96S59 729 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 WDR83Q9BRX9 315 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 TIMM29Q9BSF4 260 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 TBC1D10AQ9BXI6 508 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 NRSN2Q9GZP1 204 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 DDX47Q9H0S4 455 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 EIF2B3Q9NR50 452 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 SYBUQ9NX95 663 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 FEZ2Q9UHY8 353 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 PKP3Q9Y446 797 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 PKD1L2Q7Z442 2459 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 C2orf81A6NN90 581 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 AGRPO00253 132 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 CES2O00748 559 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 OR1I1O60431 355 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 SNX2O60749 519 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 SNRNP200O75643 2136 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 CRTAMO95727 393 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 KRT14P02533 472 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 MPSTP25325 297 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 ACRV1P26436 265 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 MGAT1P26572 445 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 MAGEA3P43357 314 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 CDH17Q12864 832 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 SQSTM1Q13501 440 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 C16orf72Q14CZ0 275 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 SEPT7Q16181 437 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 CCDC137Q6PK04 289 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 SNX20Q7Z614 316 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 NAT8LQ8N9F0 302 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 OR6C4Q8NGE1 309 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 LKAAEAR1Q8TD35 194 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 STYXQ8WUJ0 223 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 HDAC10Q969S8 669 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 MFSD3Q96ES6 412 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 CRELD1Q96HD1 420 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 LINC00615Q96LM1 132 aaPredicted RBP12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 PWWP2AQ96N64 755 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 DEPDC7Q96QD5 511 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 FERMT1Q9BQL6 677 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 SATB2Q9UPW6 733 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 TCAF1Q9Y4C2 921 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 SMG1Q96Q15 3661 aaKnown RBP12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 SDK2Q58EX2 2172 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 BSNQ9UPA5 3926 aa12.42□□□□□ -0.42
RABGGTA-207ENST00000558936 IGHV5-10-1A0A0J9YXX1 117 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 ERI2A8K979 691 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 GPR89AB7ZAQ6 455 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 PGRMC1O00264 195 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 KMOO15229 486 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 PSMD3O43242 534 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 BRINP1O60477 761 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 PHF2O75151 1096 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 TCEA3O75764 348 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 GOT2P00505 430 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 GPR89BP0CG08 455 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 TPBGLP0DKB5 382 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 XRCC1P18887 633 aaPredicted RBP12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 TPSB2P20231 275 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 PDHA2P29803 388 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 ARCN1P48444 511 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 SESN2P58004 480 aaPredicted RBP12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 GNG11P61952 73 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 PPP1CAP62136 330 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 MRPS25P82663 173 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 GPS1Q13098 491 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 ITGA9Q13797 1035 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 SEPT6Q14141 434 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 TPSAB1Q15661 275 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 BCL7AQ4VC05 210 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 MSS51Q4VC12 460 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 LDLRAP1Q5SW96 308 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 FNBP1LQ5T0N5 605 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 METRNLQ641Q3 311 aa12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 DUS1LQ6P1R4 473 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-207ENST00000558936 WASH2PQ6VEQ5 465 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms