RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 MCOLN3Q8TDD5 553 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 HMX1Q9NP08 348 aaPredicted RBP15.3■□□□□ 0.04
AP4E1-202ENST00000558439 PCDH12Q9NPG4 1184 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 G3V2T6 193 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 SYN3O14994 580 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 GJB5O95377 273 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 GNPDA1P46926 289 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 ARCN1P48444 511 aaKnown RBP15.29■□□□□ 0.04
AP4E1-202ENST00000558439 SEMA3BQ13214 749 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 BTG3Q14201 252 aaPredicted RBP15.29■□□□□ 0.04
AP4E1-202ENST00000558439 TTC23Q5W5X9 447 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 LYSMD3Q7Z3D4 306 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 ARL14EPQ8N8R7 260 aaPredicted RBP15.29■□□□□ 0.04
AP4E1-202ENST00000558439 FAM81AQ8TBF8 368 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 TRIB2Q92519 343 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 PYCR2Q96C36 320 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 Q9Y3F1 56 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 WDR47O94967 919 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 GPIP06744 558 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 RPL10P27635 214 aaKnown RBP15.29■□□□□ 0.04
AP4E1-202ENST00000558439 AQP1P29972 269 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 ACLYP53396 1101 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 ZCCHC8Q6NZY4 707 aaKnown RBP15.29■□□□□ 0.04
AP4E1-202ENST00000558439 NECAB2Q7Z6G3 386 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 ADHFE1Q8IWW8 467 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 MARVELD2Q8N4S9 558 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 SPATA17Q96L03 361 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 MRPL9Q9BYD2 267 aaKnown RBP15.29■□□□□ 0.04
AP4E1-202ENST00000558439 MEAF6Q9HAF1 191 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 MRM3Q9HC36 420 aaKnown RBP15.29■□□□□ 0.04
AP4E1-202ENST00000558439 MYO7AQ13402 2215 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 ANKRD66B4E2M5 251 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 ZSCAN9O15535 394 aaPredicted RBP15.29■□□□□ 0.04
AP4E1-202ENST00000558439 PRAMEF11O60813 436 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 ZNF623O75123 536 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 EOMESO95936 686 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 OR56A5P0C7T3 313 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 GKP32189 559 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 SYTL1Q8IYJ3 562 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 LILRA2Q8N149 483 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 UTP15Q8TED0 518 aaKnown RBP15.29■□□□□ 0.04
AP4E1-202ENST00000558439 KIAA1191Q96A73 305 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 SCLYQ96I15 445 aa15.29■□□□□ 0.04
AP4E1-202ENST00000558439 NSUN3Q9H649 340 aaKnown RBP15.29■□□□□ 0.04
AP4E1-202ENST00000558439 INTS10Q9NVR2 710 aaKnown RBP15.29■□□□□ 0.04
AP4E1-202ENST00000558439 ARIH1Q9Y4X5 557 aaPredicted RBP15.29■□□□□ 0.04
AP4E1-202ENST00000558439 FOXD2O60548 495 aaPredicted RBP15.28■□□□□ 0.04
AP4E1-202ENST00000558439 HSMCR30P0CW71 290 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 G6PDP11413 515 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 ALOX15P16050 662 aaPredicted RBP15.28■□□□□ 0.04
AP4E1-202ENST00000558439 ERVK-8P63133 956 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 ABRQ12979 859 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 KRT33BQ14525 404 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 BROXQ5VW32 411 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 DENND5AQ6IQ26 1287 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 GANCQ8TET4 914 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 LRTM1Q9HBL6 345 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 CD84Q9UIB8 345 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 MAGEL2Q9UJ55 1249 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 AQP12BA6NM10 295 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 PAPSS2O95340 614 aaPredicted RBP15.28■□□□□ 0.04
AP4E1-202ENST00000558439 GSRP00390 522 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 COX7A2P14406 83 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 SERPINB10P48595 397 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 ACSM2AQ08AH3 577 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 ACSM2BQ68CK6 577 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 ZNF549Q6P9A3 640 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 KDELC1Q6UW63 502 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 ERMP1Q7Z2K6 904 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 C11orf96Q7Z7L8 435 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 C11orf74Q86VG3 221 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 AQP12AQ8IXF9 295 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 GPR156Q8NFN8 814 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 RORBQ92753 470 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 C8orf48Q96LL4 319 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 C1orf74Q96LT6 269 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 COPS8Q99627 209 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 GSTO2Q9H4Y5 243 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 RERGLQ9H628 205 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 UBAP1Q9NZ09 502 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 KIF13BQ9NQT8 1826 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 MTMR11A4FU01 709 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 LAPTM5Q13571 262 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 PSAPL1Q6NUJ1 521 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 CYP20A1Q6UW02 462 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 KCTD8Q6ZWB6 473 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 TRPV3Q8NET8 790 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 OR13J1Q8NGT2 312 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 DACH2Q96NX9 599 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 ATP13A3Q9H7F0 1226 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 OSER1Q9NX31 292 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 DGKBQ9Y6T7 804 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 SSC5DA1L4H1 1573 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 A0A1W2PP18 115 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 RFXANKO14593 260 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 ZNF195O14628 629 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 STK16O75716 305 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 CAPN3P20807 821 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 MAPK1P28482 360 aa15.28■□□□□ 0.04
AP4E1-202ENST00000558439 KCNC1P48547 511 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms