RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ZNF398Q8TD17 642 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 NAT14Q8WUY8 206 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 GBF1Q92538 1859 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 PTERQ96BW5 349 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 SGF29Q96ES7 293 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 MSLNLQ96KJ4 702 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 TSNARE1Q96NA8 513 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 GPR21Q99679 349 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 C19orf43Q9BQ61 176 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 KXD1Q9BQD3 176 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 BOCQ9BWV1 1114 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 TRIM55Q9BYV6 548 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 MRPL46Q9H2W6 279 aaKnown RBP7.31□□□□□ -1.24
SPG11-204ENST00000557866 PRO3102Q9H379 93 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 ZNF576Q9H609 170 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 PCDH12Q9NPG4 1184 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 GTSE1Q9NYZ3 720 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 DEC1Q9P2X7 70 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 MARCOQ9UEW3 520 aaPredicted RBP7.31□□□□□ -1.24
SPG11-204ENST00000557866 IL36AQ9UHA7 158 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 SARDHQ9UL12 918 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 TMPRSS11EQ9UL52 423 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 TRIM33Q9UPN9 1127 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 DNAJC16Q9Y2G8 782 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 RRP15Q9Y3B9 282 aaKnown RBP7.31□□□□□ -1.24
SPG11-204ENST00000557866 PRSS21Q9Y6M0 314 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 SLC30A1Q9Y6M5 507 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 USH1CQ9Y6N9 552 aa7.31□□□□□ -1.24
SPG11-204ENST00000557866 HELZP42694 1942 aaKnown RBP7.31□□□□□ -1.24
SPG11-204ENST00000557866 A0A0G2JND7 137 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 GLYATL1P3A0A0U1RQE8 302 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 A0A1W2PQ67 120 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 AGAP14A8MT82 685 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 IQCF5A8MTL0 148 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 HGSO14964 777 aaPredicted RBP7.3□□□□□ -1.24
SPG11-204ENST00000557866 ZBTB14O43829 449 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 PRAMEF1O95521 474 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 TSPAN12O95859 305 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 CHRNGP07510 517 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 KITP10721 976 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 LAMP2P13473 410 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 PCSK2P16519 638 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 ZNF37AP17032 561 aaPredicted RBP7.3□□□□□ -1.24
SPG11-204ENST00000557866 TFEBP19484 476 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 CD9P21926 228 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 ATP5F1P24539 256 aaPredicted RBP7.3□□□□□ -1.24
SPG11-204ENST00000557866 MPSTP25325 297 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 VIPR1P32241 457 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 SPAM1P38567 509 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 SLC26A3P40879 764 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 PTGER3P43115 390 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 RECQLP46063 649 aaPredicted RBP7.3□□□□□ -1.24
SPG11-204ENST00000557866 SPINT3P49223 89 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 TTPAP49638 278 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 ARFIP2P53365 341 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 PRKAA2P54646 552 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 NAGLUP54802 743 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 ADARP55265 1226 aaKnown RBP7.3□□□□□ -1.24
SPG11-204ENST00000557866 CORO7P57737 925 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 DNAJB13P59910 316 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 NFATC2Q13469 925 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 COL19A1Q14993 1142 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 SETDB1Q15047 1291 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 ACAP2Q15057 778 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 OR4D1Q15615 310 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 FAM83EQ2M2I3 478 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 HNRNPA1L2Q32P51 320 aaKnown RBP7.3□□□□□ -1.24
SPG11-204ENST00000557866 GLIPR1L2Q4G1C9 344 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 ZNF805Q5CZA5 627 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 AGAP9Q5VTM2 703 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 BRAT1Q6PJG6 821 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 CCDC121Q6ZUS5 278 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 USP45Q70EL2 814 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 HSD11B1LQ7Z5J1 315 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 SNX20Q7Z614 316 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 CCDC91Q7Z6B0 441 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 CRLF3Q8IUI8 442 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 STK40Q8N2I9 435 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 TERB1Q8NA31 727 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 SIDT2Q8NBJ9 832 aaKnown RBP7.3□□□□□ -1.24
SPG11-204ENST00000557866 LKAAEAR1Q8TD35 194 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 FGF14Q92915 247 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 ARRDC3Q96B67 414 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 ELSPBP1Q96BH3 223 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 PRR11Q96HE9 360 aaPredicted RBP7.3□□□□□ -1.24
SPG11-204ENST00000557866 FAM129BQ96TA1 746 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 PLCD4Q9BRC7 762 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 TMEM120AQ9BXJ8 343 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 DRC3Q9H069 523 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 MYLK2Q9H1R3 596 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 TMEM245Q9H330 911 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 POMKQ9H5K3 350 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 ALG9Q9H6U8 611 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 ASB8Q9H765 288 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 AKTIPQ9H8T0 292 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 POPDC3Q9HBV1 291 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 FBRSL1Q9HCM7 1045 aaKnown RBP7.3□□□□□ -1.24
SPG11-204ENST00000557866 THG1LQ9NWX6 298 aaKnown RBP7.3□□□□□ -1.24
SPG11-204ENST00000557866 TAS2R13Q9NYV9 303 aa7.3□□□□□ -1.24
SPG11-204ENST00000557866 DKK3Q9UBP4 350 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms