RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 FAM219AQ8IW50 185 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 MAML2Q8IZL2 1156 aaPredicted RBP3.1□□□□□ -1.91
TRAV28-201ENST00000557548 BEST3Q8N1M1 668 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 CSNK2A3Q8NEV1 391 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 HMGCLL1Q8TB92 370 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 HASPINQ8TF76 798 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 ADAMTS14Q8WXS8 1223 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 ATP6V0A1Q93050 837 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 RHBDF1Q96CC6 855 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 ORAI1Q96D31 301 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 SPDL1Q96EA4 605 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 PDLIM5Q96HC4 596 aaKnown RBP3.1□□□□□ -1.91
TRAV28-201ENST00000557548 TMEM237Q96Q45 408 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 EGFL8Q99944 293 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 INPP5KQ9BT40 448 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 SEZ6LQ9BYH1 1024 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 TMEM39BQ9GZU3 492 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 SLC5A7Q9GZV3 580 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 FAM234AQ9H0X4 552 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 CLK4Q9HAZ1 481 aaKnown RBP3.1□□□□□ -1.91
TRAV28-201ENST00000557548 CNGB3Q9NQW8 809 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 TRMT1Q9NXH9 659 aaKnown RBP3.1□□□□□ -1.91
TRAV28-201ENST00000557548 ERAP1Q9NZ08 941 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 OR6C3Q9NZP0 311 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 MSRB1Q9NZV6 116 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 CDC14AQ9UNH5 594 aa3.1□□□□□ -1.91
TRAV28-201ENST00000557548 SMIM30A4D0T7 59 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 ANKUB1A6NFN9 424 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 TMEM191CA6NGB0 347 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 LINC01548A6NM66 108 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 KRTAP29-1A8MX34 341 aaPredicted RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 TMEM189-UBE2V1I3L0A0 370 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 J3KR12 359 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 J3QR06 171 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 SLC33A1O00400 549 aaPredicted RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 IFIT3O14879 490 aaKnown RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 TIMM23O14925 209 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 MDM4O15151 490 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 ZBTB43O43298 467 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 LDB2O43679 373 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 SSX4O60224 188 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 B3GALNT1O75752 331 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 GCNT3O95395 438 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 OLFM2O95897 454 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 PNPP00491 289 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 SLC4A1P02730 911 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 INHBAP08476 426 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 VIMP08670 466 aaKnown RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 FAM200BP0CF97 657 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 CTSAP10619 480 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 EEF2P13639 858 aaKnown RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 P4HA1P13674 534 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 DDX5P17844 614 aaKnown RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 KRT4P19013 534 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 HRH2P25021 359 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 CDC25CP30307 473 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 HNRNPH1P31943 449 aaKnown RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 APOBEC1P41238 236 aaKnown RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 PTH2RP49190 550 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 NAGLUP54802 743 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 P2RX3P56373 397 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 SELENOVP59797 346 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 CDK3Q00526 305 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 IL1RL1Q01638 556 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 GHRHRQ02643 423 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 ZNF91Q05481 1191 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 FOXM1Q08050 763 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 CBX3Q13185 183 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 UBE2V1Q13404 147 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 MELKQ14680 651 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 DUSP6Q16828 381 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 SLC39A12Q504Y0 691 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 KCNT1Q5JUK3 1230 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 DNTTIP2Q5QJE6 756 aaKnown RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 DCST1Q5T197 706 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 ZDHHC20Q5W0Z9 365 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 LCN10Q6JVE6 187 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 DPY19L2P1Q6NXN4 242 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 SLC36A4Q6YBV0 504 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 ZNF782Q6ZMW2 699 aaPredicted RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 ZNF66Q6ZN08 573 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 TMEM182Q6ZP80 229 aaPredicted RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 CATSPER4Q7RTX7 472 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 TLK2Q86UE8 772 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 NRROSQ86YC3 692 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 DZIP1Q86YF9 867 aaKnown RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 ERC1Q8IUD2 1116 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 TIGD4Q8IY51 512 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 SFRP1Q8N474 314 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 BOLLQ8N9W6 283 aaKnown RBP3.09□□□□□ -1.91
TRAV28-201ENST00000557548 UXS1Q8NBZ7 420 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 SLC44A5Q8NCS7 719 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 ENGASEQ8NFI3 743 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 OR2AJ1Q8NGZ0 328 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 EXD1Q8NHP7 514 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 OCC1Q8TAD7 63 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 SPATA20Q8TB22 786 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 TMEM163Q8TC26 289 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 BICD2Q8TD16 824 aa3.09□□□□□ -1.91
TRAV28-201ENST00000557548 HEXDCQ8WVB3 486 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms