RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 GPC4O75487 556 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 RGS11O94810 467 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 LDLRP01130 860 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 LINGO3P0C6S8 592 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 SAT1P21673 171 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ABCG1P45844 678 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 NRIP1P48552 1158 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF41P51814 821 aaPredicted RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 LINC00205P59089 165 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 TAS2R38P59533 333 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 TRAF3Q13114 568 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ITGADQ13349 1161 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 COG2Q14746 738 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ETFDHQ16134 617 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 KIF19Q2TAC6 998 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 FILIP1LQ4L180 1135 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 C9orf152Q5JTZ5 239 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ERMARDQ5T6L9 678 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 GKAP1Q5VSY0 366 aaPredicted RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 GPR139Q6DWJ6 353 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 C11orf88Q6PI97 169 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ABRAXAS1Q6UWZ7 409 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF534Q76KX8 674 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 MTERF4Q7Z6M4 381 aaKnown RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 HAPLN4Q86UW8 402 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ZC3HC1Q86WB0 502 aaKnown RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ZDHHC17Q8IUH5 632 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 SRBD1Q8N5C6 995 aaKnown RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 OIT3Q8WWZ8 545 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 MIB2Q96AX9 1013 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 CALML4Q96GE6 196 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 DUX5Q96PT3 197 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 GSDMAQ96QA5 445 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 PCGF1Q9BSM1 259 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 MOV10L1Q9BXT6 1211 aaKnown RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 SPATC1LQ9H0A9 340 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 RABL2AQ9UBK7 228 aaPredicted RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 TSPYL4Q9UJ04 414 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 TINAGQ9UJW2 476 aa1.69□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF215Q9UL58 517 aaPredicted RBP1.69□□□□□ -2.14
HIF1A-212ENST00000557538 OR2M5A3KFT3 312 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF587BE7ETH6 402 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 M0QX08 132 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 KIF2AO00139 706 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 AP3D1O14617 1153 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PTGESO14684 152 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 RNF113AO15541 343 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 OR10H2O60403 315 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 TPM3P06753 285 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 AKR1B1P15121 316 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CD9P21926 228 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PTPRGP23470 1445 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 LMO1P25800 156 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PPARGP37231 505 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 UBASH3AP57075 661 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 BNC1Q01954 994 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 RUNX1T1Q06455 604 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 MAD2L1Q13257 205 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 TDGQ13569 410 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ALCAMQ13740 583 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF234Q14588 700 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 NSUN5P2Q63ZY6 315 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 AWAT2Q6E213 333 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CCNI2Q6ZMN8 369 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CCDC186Q7Z3E2 898 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 KBTBD6Q86V97 674 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 FJX1Q86VR8 437 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 TDRPQ86YL5 185 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 LRRC49Q8IUZ0 686 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CEP97Q8IW35 865 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 C1orf87Q8N0U7 546 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CHCHD4Q8N4Q1 142 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 FAM184AQ8NB25 1140 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 MNS1Q8NEH6 495 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 OR1J2Q8NGS2 313 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ERGIC1Q969X5 290 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PGAP3Q96FM1 320 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 VMP1Q96GC9 406 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 SMC6Q96SB8 1091 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 MEIS3Q99687 375 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 BAG1Q99933 345 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 SLF1Q9BQI6 1058 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 SLC25A23Q9BV35 468 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 MAK16Q9BXY0 300 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 TSPYL1Q9H0U9 437 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 RABEP2Q9H5N1 569 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF701Q9NV72 531 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ADD3Q9UEY8 706 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PCSK1NQ9UHG2 260 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 DBNLQ9UJU6 430 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ATAD2BQ9ULI0 1458 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PA2G4Q9UQ80 394 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ITM2BQ9Y287 266 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PTPRCP08575 1304 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 C15orf62A8K5M9 175 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 BTBD18B2RXH4 712 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PSMD14O00487 310 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PES1O00541 588 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 NEMFO60524 1076 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 MTRF1O75570 445 aaKnown RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms