RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 PILRAQ9UKJ1 303 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 TRHDEQ9UKU6 1024 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 TMPRSS11EQ9UL52 423 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 PKP3Q9Y446 797 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 PCDHA13Q9Y5I0 950 aa13.94□□□□□ -0.18
SNX6-210ENST00000557341 HEMK1Q9Y5R4 338 aaPredicted RBP13.94□□□□□ -0.18
SNX6-210ENST00000557341 UBR5O95071 2799 aaPredicted RBP13.94□□□□□ -0.18
SNX6-210ENST00000557341 GLYATL1P3A0A0U1RQE8 302 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 ZNF891A8MT65 544 aaPredicted RBP13.93□□□□□ -0.18
SNX6-210ENST00000557341 APOC4-APOC2K7ER74 178 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 POLR1CO15160 346 aaPredicted RBP13.93□□□□□ -0.18
SNX6-210ENST00000557341 PPFIA2O75334 1257 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 ZIC2O95409 532 aaPredicted RBP13.93□□□□□ -0.18
SNX6-210ENST00000557341 APOC2P02655 101 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 BRAFP15056 766 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 TYRP1P17643 537 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 AMD1P17707 334 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 HALP42357 657 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 CAPZBP47756 277 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 DRG2P55039 364 aaKnown RBP13.93□□□□□ -0.18
SNX6-210ENST00000557341 XRCC4Q13426 336 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 ITGA9Q13797 1035 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 LDLRAP1Q5SW96 308 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 CCDC181Q5TID7 509 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 AGAP9Q5VTM2 703 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 FAM151BQ6UXP7 276 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 WASH2PQ6VEQ5 465 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 BBS12Q6ZW61 710 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 PRICKLE2Q7Z3G6 844 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 C11orf96Q7Z7L8 435 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 RBM12BQ8IXT5 1001 aaKnown RBP13.93□□□□□ -0.18
SNX6-210ENST00000557341 KRT35Q92764 455 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 CXorf40BQ96DE9 158 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 C9orf72Q96LT7 481 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 FERMT1Q9BQL6 677 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 GBA3Q9H227 469 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 GPN2Q9H9Y4 310 aaPredicted RBP13.93□□□□□ -0.18
SNX6-210ENST00000557341 APMAPQ9HDC9 416 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 IL26Q9NPH9 171 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 WASH6PQ9NQA3 447 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 SIDT1Q9NXL6 827 aaKnown RBP13.93□□□□□ -0.18
SNX6-210ENST00000557341 OGFRQ9NZT2 677 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 IL17CQ9P0M4 197 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 TFR2Q9UP52 801 aa13.93□□□□□ -0.18
SNX6-210ENST00000557341 TMEM184BQ9Y519 407 aaPredicted RBP13.93□□□□□ -0.18
SNX6-210ENST00000557341 FLNBO75369 2602 aaKnown RBP13.92□□□□□ -0.18
SNX6-210ENST00000557341 MACROD2A1Z1Q3 448 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 OR52A4PA6NMU1 304 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 H7C0C1 242 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 TOX3O15405 576 aaPredicted RBP13.92□□□□□ -0.18
SNX6-210ENST00000557341 CAPN5O15484 640 aaPredicted RBP13.92□□□□□ -0.18
SNX6-210ENST00000557341 GPR39O43194 453 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 KCNJ13O60928 360 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 STK17BO94768 372 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 MAP4P27816 1152 aaKnown RBP13.92□□□□□ -0.18
SNX6-210ENST00000557341 ATP5OP48047 213 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 COPS2P61201 443 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 GPR18Q14330 331 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 ITPRIPL1Q6GPH6 555 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 BORAQ6PGQ7 559 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 DDHD1Q8NEL9 900 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 CALR3Q96L12 384 aaKnown RBP13.92□□□□□ -0.18
SNX6-210ENST00000557341 CATSPER2Q96P56 530 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 TGM7Q96PF1 710 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 EFHD1Q9BUP0 239 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 HEMGNQ9BXL5 484 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 TRIT1Q9H3H1 467 aaKnown RBP13.92□□□□□ -0.18
SNX6-210ENST00000557341 ZNF768Q9H5H4 540 aaKnown RBP13.92□□□□□ -0.18
SNX6-210ENST00000557341 SLC40A1Q9NP59 571 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 STARD5Q9NSY2 213 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 SMOXQ9NWM0 555 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 SLC30A1Q9Y6M5 507 aa13.92□□□□□ -0.18
SNX6-210ENST00000557341 RASSF9O75901 435 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 ANXA9O76027 345 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 IPO7O95373 1038 aaKnown RBP13.91□□□□□ -0.18
SNX6-210ENST00000557341 RBL1P28749 1068 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 AKT1P31749 480 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 CTNNA1P35221 906 aaKnown RBP13.91□□□□□ -0.18
SNX6-210ENST00000557341 GEMP55040 296 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 FOXM1Q08050 763 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 DMPKQ09013 629 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 ABHD18Q0P651 414 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 CHRNA6Q15825 494 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 AMZ2Q86W34 360 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 RSC1A1Q92681 617 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 SLC45A3Q96JT2 553 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 SPRY4Q9C004 299 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 ADNPQ9H2P0 1102 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 TRIM10Q9UDY6 481 aa13.91□□□□□ -0.18
SNX6-210ENST00000557341 GAPDHSO14556 408 aaPredicted RBP13.9□□□□□ -0.18
SNX6-210ENST00000557341 STX7O15400 261 aaKnown RBP13.9□□□□□ -0.18
SNX6-210ENST00000557341 PJA2O43164 708 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 BUD23O43709 281 aaKnown RBP13.9□□□□□ -0.18
SNX6-210ENST00000557341 PRAMEF1O95521 474 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 DLGAP3O95886 979 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 ITGB6P18564 788 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 CTNNA2P26232 953 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 LEPRP48357 1165 aaKnown RBP13.9□□□□□ -0.18
SNX6-210ENST00000557341 CTSCP53634 463 aa13.9□□□□□ -0.18
SNX6-210ENST00000557341 OTUD4Q01804 1114 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms