RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 FOXD4Q12950 439 aaPredicted RBP3.95□□□□□ -1.78
CHD8-212ENST00000557329 BYSLQ13895 437 aaKnown RBP3.95□□□□□ -1.78
CHD8-212ENST00000557329 GIT2Q14161 759 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 C8orf82Q6P1X6 216 aaPredicted RBP3.95□□□□□ -1.78
CHD8-212ENST00000557329 GJB7Q6PEY0 223 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 METTL7BQ6UX53 244 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 Q6ZTK2 550 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 NKAPQ8N5F7 415 aaKnown RBP3.95□□□□□ -1.78
CHD8-212ENST00000557329 TMEM217Q8N7C4 229 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 SCAIQ8N9R8 606 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 CMASQ8NFW8 434 aaPredicted RBP3.95□□□□□ -1.78
CHD8-212ENST00000557329 B4GALNT2Q8NHY0 566 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 INPP5DQ92835 1189 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 CASD1Q96PB1 797 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 SEC62Q99442 399 aaKnown RBP3.95□□□□□ -1.78
CHD8-212ENST00000557329 CD180Q99467 661 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 HNRNPABQ99729 332 aaKnown RBP3.95□□□□□ -1.78
CHD8-212ENST00000557329 TMEM117Q9H0C3 514 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 CHODLQ9H9P2 273 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 WDR6Q9NNW5 1121 aaKnown RBP3.95□□□□□ -1.78
CHD8-212ENST00000557329 HEBP1Q9NRV9 189 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 MRPL17Q9NRX2 175 aaKnown RBP3.95□□□□□ -1.78
CHD8-212ENST00000557329 RGS18Q9NS28 235 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 TCP11L1Q9NUJ3 509 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 TMEM161AQ9NX61 479 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 ZBED9Q6R2W3 1325 aa3.95□□□□□ -1.78
CHD8-212ENST00000557329 MIA3Q5JRA6 1907 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.94□□□□□ -1.78
CHD8-212ENST00000557329 SHISA7A6NL88 538 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 IFRD1O00458 451 aaPredicted RBP3.94□□□□□ -1.78
CHD8-212ENST00000557329 IL1AP01583 271 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 PRSS2P07478 247 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 CNPP09543 421 aaKnown RBP3.94□□□□□ -1.78
CHD8-212ENST00000557329 POLR2MP0CAP2 368 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 HSD3B1P14060 373 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 ARSAP15289 507 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 GNLYP22749 145 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 GPD2P43304 727 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 MAGEA9P43362 315 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 CCR3P51677 355 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 CLCN4P51793 760 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 CDH12P55289 794 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 SELENOVP59797 346 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 HAND2P61296 217 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 ECT2LQ008S8 904 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 CREB5Q02930 508 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 ST3GAL1Q11201 340 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 PDCLQ13371 301 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 POSTNQ15063 836 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 QRICH1Q2TAL8 776 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 C10orf62Q5T681 223 aaPredicted RBP3.94□□□□□ -1.78
CHD8-212ENST00000557329 NUGGCQ68CJ6 796 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 TCEAL6Q6IPX3 200 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 JMJD6Q6NYC1 403 aaPredicted RBP3.94□□□□□ -1.78
CHD8-212ENST00000557329 KIAA1324Q6UXG2 1013 aaKnown RBP3.94□□□□□ -1.78
CHD8-212ENST00000557329 SLC39A11Q8N1S5 342 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 LRRC57Q8N9N7 239 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 TEX45Q8NA69 505 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 DEFB124Q8NES8 71 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 ING5Q8WYH8 240 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 SEPT1Q8WYJ6 367 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 FGF14Q92915 247 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 TCEAL3Q969E4 200 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 KIF1BPQ96EK5 621 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 FRMD8Q9BZ67 464 aaPredicted RBP3.94□□□□□ -1.78
CHD8-212ENST00000557329 ZBP1Q9H171 429 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 SMARCAD1Q9H4L7 1026 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 TTC12Q9H892 705 aaPredicted RBP3.94□□□□□ -1.78
CHD8-212ENST00000557329 KAT14Q9H8E8 782 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 CD93Q9NPY3 652 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 IFT80Q9P2H3 777 aaPredicted RBP3.94□□□□□ -1.78
CHD8-212ENST00000557329 ICKQ9UPZ9 632 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 MORC2Q9Y6X9 1032 aaPredicted RBP3.94□□□□□ -1.78
CHD8-212ENST00000557329 WDFY3Q8IZQ1 3526 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 SDK1Q7Z5N4 2213 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 WDR19Q8NEZ3 1342 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 IGSF9BQ9UPX0 1349 aa3.94□□□□□ -1.78
CHD8-212ENST00000557329 KIAA1217Q5T5P2 1943 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 FAM157AC9JC47 383 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 DDX39AO00148 427 aaKnown RBP3.93□□□□□ -1.78
CHD8-212ENST00000557329 HSPB6O14558 160 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 FIBPO43427 364 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 GUCY1B2O75343 617 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 VTNP04004 478 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 URODP06132 367 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 NGFRP08138 427 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 ZNF806P0C7X5 589 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 PEPDP12955 493 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 ARRB2P32121 409 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 OR1G1P47890 313 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 PRKAA2P54646 552 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 NTHL1P78549 312 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 CUL4BQ13620 913 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 HTR4Q13639 388 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 TDRD12Q587J7 1177 aaKnown RBP3.93□□□□□ -1.78
CHD8-212ENST00000557329 FNBP1LQ5T0N5 605 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 MARCH8Q5T0T0 291 aa3.93□□□□□ -1.78
CHD8-212ENST00000557329 GPATCH4Q5T3I0 446 aaKnown RBP3.93□□□□□ -1.78
CHD8-212ENST00000557329 CRELD2Q6UXH1 353 aaPredicted RBP3.93□□□□□ -1.78
CHD8-212ENST00000557329 SYNE3Q6ZMZ3 975 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms