RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PGLSO95336 258 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 CALCAP01258 141 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 HASPINQ8TF76 798 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ING5Q8WYH8 240 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF512BQ96KM6 892 aaPredicted RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 DHRS1Q96LJ7 313 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 TAPBPLQ9BX59 468 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 KCNF1Q9H3M0 494 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 FAM124BQ9H5Z6 455 aaPredicted RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 TMEM260Q9NX78 707 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 NRKQ7Z2Y5 1582 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 HHLA1C9JL84 531 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 PRKAB2O43741 272 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ATP6V1G1O75348 118 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ASGR1P07306 291 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 AMD1P17707 334 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 CYCSP99999 105 aaKnown RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 IQCCQ4KMZ1 466 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 CTXN3Q4LDR2 81 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF550Q7Z398 422 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 PSTKQ8IV42 348 aaKnown RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 C5orf34Q96MH7 638 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ASB7Q9H672 318 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ABCC13Q9NSE7 274 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 CEP290O15078 2479 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 TFPIP10646 304 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 GLP1RP43220 463 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 VEGFCP49767 419 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 CCDC58Q4VC31 144 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ZER1Q7Z7L7 766 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 CD300LFQ8TDQ1 290 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 SYT15Q9BQS2 421 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 TM7SF2O76062 418 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 NCK1P16333 377 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 CSTF1Q05048 431 aaKnown RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 LIN52Q52LA3 116 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ECHDC2Q86YB7 292 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 CYTH4Q9UIA0 394 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 DNAJB6O75190 326 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 GALNT15Q8N3T1 639 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 NLRP1Q9C000 1473 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 AZIN1O14977 448 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 NRP2O60462 931 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 FBLN1P23142 703 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ATP5A1P25705 553 aaKnown RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 LSM3P62310 102 aaKnown RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF45Q02386 682 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 GCNT6Q5T4J0 391 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 C17orf64Q86WR6 236 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 KLHL36Q8N4N3 616 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 LSM14AQ8ND56 463 aaKnown RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 OR7G2Q8NG99 324 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 TMEM143Q96AN5 459 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 SLC6A16Q9GZN6 736 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 GDF3Q9NR23 364 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 MAP10Q9P2G4 905 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 SSTR3P32745 418 aaPredicted RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 POLR2HP52434 150 aaKnown RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 NCS1P62166 190 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 SMYD5Q6GMV2 418 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 PHYKPLQ8IUZ5 450 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 CPSF7Q8N684 471 aaKnown RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF570Q96NI8 536 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ORAI2Q96SN7 254 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 SEMA4BQ9NPR2 832 aaPredicted RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF608Q9ULD9 1512 aaPredicted RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ELOVL7A1L3X0 281 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 FGF19O95750 216 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 TRBC1P01850 177 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 NUDT17P0C025 328 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 GRK6P43250 576 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF792Q3KQV3 632 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ZIK1Q3SY52 487 aaPredicted RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 GPR135Q8IZ08 494 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ARRDC4Q8NCT1 418 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 TTLQ8NG68 377 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ZYG11BQ9C0D3 744 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 PCDHB1Q9Y5F3 818 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 VARSP26640 1264 aaKnown RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 MTM1Q13496 603 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 SAPCD2Q86UD0 394 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 MTFR1LQ9H019 292 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 ATP13A1Q9HD20 1204 aa8.76□□□□□ -1.01
SYNE3-205ENST00000557275 PTBP2Q9UKA9 531 aaKnown RBP8.76□□□□□ -1.01
SYNE3-205ENST00000557275 C9IYK1 514 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 ATG13O75143 517 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 GJA9P57773 515 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 HERV-K104P61576 105 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 RSPH9Q9H1X1 276 aaPredicted RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 POPDC2Q9HBU9 364 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 NKX6-1P78426 367 aaPredicted RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 LRIF1Q5T3J3 769 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 NIPAL1Q6NVV3 410 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 PAQR7Q86WK9 346 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 COQ8BQ96D53 544 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 POTEKPQ9BYX7 375 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 SNRNP200O75643 2136 aaKnown RBP8.75□□□□□ -1.01
SYNE3-205ENST00000557275 CDH11P55287 796 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 RAB31Q13636 194 aa8.75□□□□□ -1.01
SYNE3-205ENST00000557275 PUM1Q14671 1186 aaKnown RBP eCLIP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms