RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 RNASE9P60153 205 aaKnown RBP6.79□□□□□ -1.32
ATXN3-236ENST00000556220 ACTR1AP61163 376 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 RHOAP61586 193 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 CETN1Q12798 172 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 CHAF1BQ13112 559 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 IL11RAQ14626 422 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 GRM3Q14832 879 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 UGT8Q16880 541 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 SLC25A52Q3SY17 297 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 PLEKHN1Q494U1 663 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-236ENST00000556220 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-236ENST00000556220 AFMIDQ63HM1 303 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 LIPIQ6XZB0 460 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 RHOT1Q8IXI2 618 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 SFRP1Q8N474 314 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 CISD2Q8N5K1 135 aaKnown RBP6.79□□□□□ -1.32
ATXN3-236ENST00000556220 RNF31Q96EP0 1072 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 TBCBQ99426 244 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 NCAPGQ9BPX3 1015 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 ANP32EQ9BTT0 268 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 TEX101Q9BY14 249 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 GPR87Q9BY21 358 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 FRMD8Q9BZ67 464 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-236ENST00000556220 GTPBP4Q9BZE4 634 aaKnown RBP6.79□□□□□ -1.32
ATXN3-236ENST00000556220 ACTL8Q9H568 366 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 LHX9Q9NQ69 397 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 PHPT1Q9NRX4 125 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-236ENST00000556220 KLHL3Q9UH77 587 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 DNAI1Q9UI46 699 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 DUSP13Q9UII6 198 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 PLEKHM1Q9Y4G2 1056 aa6.79□□□□□ -1.32
ATXN3-236ENST00000556220 TNRC6AQ8NDV7 1962 aaKnown RBP6.78□□□□□ -1.32
ATXN3-236ENST00000556220 SEC16AO15027 2179 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 A0A1B0GVL5 298 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 FAM221AA4D161 298 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 LRRTM2O43300 516 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 DIAPH2O60879 1101 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 RAMP2O60895 175 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 SPAG6O75602 509 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 BPNT1O95861 308 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 MT-ND3P03897 115 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 IVLP07476 585 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 ANKRD34CP0C6C1 535 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 ELFN1P0C7U0 828 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 LPOP22079 712 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-236ENST00000556220 PTPN4P29074 926 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 PER3P56645 1201 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 RALGDSQ12967 914 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 CYTH1Q15438 398 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 PTPN20Q4JDL3 420 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 CFAP58Q5T655 872 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 RWDD4Q6NW29 188 aaKnown RBP6.78□□□□□ -1.32
ATXN3-236ENST00000556220 SPNS3Q6ZMD2 512 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 LCNL1Q6ZST4 164 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 BNIPLQ7Z465 357 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 SYVN1Q86TM6 617 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 DNAAF5Q86Y56 855 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 CAMK1DQ8IU85 385 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 ZDHHC17Q8IUH5 632 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 PLXDC1Q8IUK5 500 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 RASGRP3Q8IV61 690 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 IQCKQ8N0W5 287 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 LILRA2Q8N149 483 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 C1orf131Q8NDD1 294 aaKnown RBP6.78□□□□□ -1.32
ATXN3-236ENST00000556220 FAM13CQ8NE31 585 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 FDCSPQ8NFU4 85 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 SLC37A2Q8TED4 501 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 CT55Q8WUE5 264 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 RNF141Q8WVD5 230 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 SH3KBP1Q96B97 665 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 BARD1Q99728 777 aaKnown RBP6.78□□□□□ -1.32
ATXN3-236ENST00000556220 TSG101Q99816 390 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 BRD8Q9H0E9 1235 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 SARS2Q9NP81 518 aaKnown RBP6.78□□□□□ -1.32
ATXN3-236ENST00000556220 UBE2TQ9NPD8 197 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-236ENST00000556220 TMEM248Q9NWD8 314 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 LHX3Q9UBR4 397 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 OR12D3Q9UGF7 316 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 SLC17A4Q9Y2C5 497 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 CORINQ9Y5Q5 1042 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 CHD5Q8TDI0 1954 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 LRP4O75096 1905 aa6.78□□□□□ -1.32
ATXN3-236ENST00000556220 SSU72P8A0A1W2PR75 194 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 ZG16O60844 167 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 FGF5P12034 268 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 PFKFB1P16118 471 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 CMA1P23946 247 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 PTGER4P35408 488 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 POLD2P49005 469 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 PMS1P54277 932 aaKnown RBP6.77□□□□□ -1.33
ATXN3-236ENST00000556220 CDK3Q00526 305 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 HHEXQ03014 270 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 EGR3Q06889 387 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 CDK18Q07002 472 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 NFATC2Q13469 925 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 CRB2Q5IJ48 1285 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 MANEALQ5VSG8 457 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 DPPA4Q7L190 304 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 GDF7Q7Z4P5 450 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 FAM131BQ86XD5 332 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms