RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ACMSDQ8TDX5 336 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 MZB1Q8WU39 189 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 GAB3Q8WWW8 586 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 KCNJ9Q92806 393 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 ISL2Q96A47 359 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 FUBP1Q96AE4 644 aaKnown RBP10.89□□□□□ -0.67
TMEM260-208ENST00000555905 SGF29Q96ES7 293 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 CABS1Q96KC9 395 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 BMFQ96LC9 184 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 HSPA12BQ96MM6 686 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 PANX3Q96QZ0 392 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 LGR4Q9BXB1 951 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 DUSP15Q9H1R2 295 aaPredicted RBP10.89□□□□□ -0.67
TMEM260-208ENST00000555905 CAB39LQ9H9S4 337 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 EBF2Q9HAK2 575 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 POPDC3Q9HBV1 291 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 AASDHPPTQ9NRN7 309 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 SNX15Q9NRS6 342 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 ATXN10Q9UBB4 475 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 TRMT6Q9UJA5 497 aaKnown RBP10.89□□□□□ -0.67
TMEM260-208ENST00000555905 TMEM98Q9Y2Y6 226 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 ACTL7BQ9Y614 415 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 OAS3Q9Y6K5 1087 aaKnown RBP10.89□□□□□ -0.67
TMEM260-208ENST00000555905 PRSS21Q9Y6M0 314 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 PIKFYVEQ9Y2I7 2098 aa10.89□□□□□ -0.67
TMEM260-208ENST00000555905 A0A087X1B8 175 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 A0A096LPK6 155 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 OR2AG2A6NM03 316 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 FOXO6A8MYZ6 492 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 GOLGA8RI6L899 631 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 KPNA5O15131 536 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 MAGEC1O60732 1142 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 NIPSNAP2O75323 286 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 RFPL1O75677 317 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 TRIM16O95361 564 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 MAGEA12P43365 314 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 THOP1P52888 689 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 TAS2R39P59534 338 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 MAGOHP61326 146 aaKnown RBP10.88□□□□□ -0.67
TMEM260-208ENST00000555905 PDE1CQ14123 709 aaPredicted RBP10.88□□□□□ -0.67
TMEM260-208ENST00000555905 NFATC4Q14934 902 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 ZKSCAN8Q15776 578 aaPredicted RBP10.88□□□□□ -0.67
TMEM260-208ENST00000555905 TMEM220Q6QAJ8 160 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 GCNT7Q6ZNI0 430 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 Q6ZSR6 202 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 OTOAQ7RTW8 1153 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 ABI3BPQ7Z7G0 1075 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 CMC1Q7Z7K0 106 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 TRAPPC5Q8IUR0 188 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 CEP97Q8IW35 865 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 TMEFF1Q8IYR6 380 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 ACVR1CQ8NER5 493 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 TTC28Q96AY4 2481 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 ALKBH8Q96BT7 664 aaKnown RBP10.88□□□□□ -0.67
TMEM260-208ENST00000555905 FAM136AQ96C01 138 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 TLCD1Q96CP7 247 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 CCDC97Q96F63 343 aaPredicted RBP10.88□□□□□ -0.67
TMEM260-208ENST00000555905 TSNARE1Q96NA8 513 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 OLFM1Q99784 485 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 MIR1-1HGQ9H1L0 117 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 VPS11Q9H270 941 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 RMI1Q9H9A7 625 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 GPAMQ9HCL2 828 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 SARS2Q9NP81 518 aaKnown RBP10.88□□□□□ -0.67
TMEM260-208ENST00000555905 SPATS2LQ9NUQ6 558 aaKnown RBP10.88□□□□□ -0.67
TMEM260-208ENST00000555905 EIF2B4Q9UI10 523 aaKnown RBP10.88□□□□□ -0.67
TMEM260-208ENST00000555905 GPR34Q9UPC5 381 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 CA5BQ9Y2D0 317 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 ANKRD6Q9Y2G4 727 aa10.88□□□□□ -0.67
TMEM260-208ENST00000555905 KMT2EQ8IZD2 1858 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 A0A0C4DFX4 3053 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 THADAQ6YHU6 1953 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 ZDBF2Q9HCK1 2354 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 FAM86C2PA6NEL3 165 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 IQCF5A8MTL0 148 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 H0Y8X5 98 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 PHGDHO43175 533 aaKnown RBP10.87□□□□□ -0.67
TMEM260-208ENST00000555905 NUAK1O60285 661 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 C2P06681 752 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 GSTM1P09488 218 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 ZNF8P17098 575 aaPredicted RBP10.87□□□□□ -0.67
TMEM260-208ENST00000555905 ITGB6P18564 788 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 CNR2P34972 360 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 CCT5P48643 541 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 PRLHRP49683 370 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 CTSCP53634 463 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 PFN3P60673 137 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 GSTM4Q03013 218 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 PTK2BQ14289 1009 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 TTLL9Q3SXZ7 439 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 BCL7AQ4VC05 210 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 CRTC3Q6UUV7 619 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 KDM7AQ6ZMT4 941 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 CEP68Q76N32 757 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 TBC1D1Q86TI0 1168 aaPredicted RBP10.87□□□□□ -0.67
TMEM260-208ENST00000555905 PIM3Q86V86 326 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 EXOC3L1Q86VI1 746 aa10.87□□□□□ -0.67
TMEM260-208ENST00000555905 DCP2Q8IU60 420 aaKnown RBP10.87□□□□□ -0.67
TMEM260-208ENST00000555905 RGL4Q8IZJ4 473 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms