RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 FAM86C2PA6NEL3 165 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 OR2AG2A6NM03 316 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 COPEO14579 308 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 GALR2O43603 387 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-220ENST00000555634 OR1I1O60431 355 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 GLRA3O75311 464 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 MTX2O75431 263 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 FAM155BO75949 473 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 TRIM16O95361 564 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 SOD1P00441 154 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 PRSS56P0CW18 603 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 THEGLP0DJG4 465 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 CD38P28907 300 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 PBLDP30039 288 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-220ENST00000555634 HOXD12P35452 270 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 TRIM23P36406 574 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 ABCG1P45844 678 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 CCT5P48643 541 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 PRLHRP49683 370 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 FGL2Q14314 439 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 FAM83EQ2M2I3 478 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 TSNAXIP1Q2TAA8 658 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 BCL7AQ4VC05 210 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 PMS2CLQ68D20 193 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 CRTC3Q6UUV7 619 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 GCNT7Q6ZNI0 430 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 PRR23BQ6ZRT6 265 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 ARMCX6Q7L4S7 300 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 ABI3BPQ7Z7G0 1075 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 TRIM74Q86UV6 250 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 SLC41A1Q8IVJ1 513 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 MYO1HQ8N1T3 1032 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 OXR1Q8N573 874 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 NKAPQ8N5F7 415 aaKnown RBP11.05□□□□□ -0.64
SHMT2-220ENST00000555634 ZBTB2Q8N680 514 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 ARFGAP2Q8N6H7 521 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 MFSD2AQ8NA29 543 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 TMEM145Q8NBT3 493 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 SKA2Q8WVK7 121 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-220ENST00000555634 ASZ1Q8WWH4 475 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 ELMO1Q92556 727 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 FUBP1Q96AE4 644 aaKnown RBP11.05□□□□□ -0.64
SHMT2-220ENST00000555634 TMEM159Q96B96 161 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 COX14Q96I36 57 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 KLF6Q99612 283 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-220ENST00000555634 CCM2Q9BSQ5 444 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 BOCQ9BWV1 1114 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 IRF2BPLQ9H1B7 796 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 P2RY12Q9H244 342 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 VPS11Q9H270 941 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 TMBIM4Q9HC24 238 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 MBNL1Q9NR56 388 aaKnown RBP11.05□□□□□ -0.64
SHMT2-220ENST00000555634 PCMTD2Q9NV79 361 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 NKIRAS1Q9NYS0 192 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 EIF2B4Q9UI10 523 aaKnown RBP11.05□□□□□ -0.64
SHMT2-220ENST00000555634 MBD1Q9UIS9 605 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-220ENST00000555634 MID2Q9UJV3 735 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 SMG5Q9UPR3 1016 aaKnown RBP11.05□□□□□ -0.64
SHMT2-220ENST00000555634 ACOT9Q9Y305 439 aa11.05□□□□□ -0.64
SHMT2-220ENST00000555634 TMEM131Q92545 1883 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 ZDBF2Q9HCK1 2354 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 A0A096LPK6 155 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 A0A1B0GTW7 788 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 PRSS38A1L453 326 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 EIF3FO00303 357 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-220ENST00000555634 TNFRSF10CO14798 259 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 LIN7AO14910 233 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-220ENST00000555634 RAD51BO15315 384 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 BCAT2O15382 392 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-220ENST00000555634 GRID2O43424 1007 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 GPR37L1O60883 481 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 KCNJ13O60928 360 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 SASH3O75995 380 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 RASGRP1O95267 797 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 C1QAP02745 245 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 GSTA1P08263 222 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 CBSLP0DN79 551 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 COL6A2P12110 1019 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 TDGF1P13385 188 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 ENO3P13929 434 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-220ENST00000555634 KRT4P19013 534 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 CD9P21926 228 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 BCKDHBP21953 392 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 FDXRP22570 491 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 DGKAP23743 735 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 GCAP28676 217 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 CBSP35520 551 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 SLC26A3P40879 764 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 CLDN2P57739 230 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 IL2P60568 153 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 PFN3P60673 137 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 DMWDQ09019 674 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 LRP8Q14114 963 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 SIM2Q14190 667 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-220ENST00000555634 RBM20Q5T481 1227 aaKnown RBP11.04□□□□□ -0.64
SHMT2-220ENST00000555634 AGAP9Q5VTM2 703 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 ENPP7Q6UWV6 458 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 Q6ZSR6 202 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 ADGRG6Q86SQ4 1221 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 TRABD2AQ86V40 505 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms