RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 ANAPC5Q9UJX4 755 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 AGO1Q9UL18 857 aaKnown RBP5.27□□□□□ -1.57
VRK1-205ENST00000555402 NOL7Q9UMY1 257 aaKnown RBP5.27□□□□□ -1.57
VRK1-205ENST00000555402 B3GALT5Q9Y2C3 310 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 CCL27Q9Y4X3 112 aa5.27□□□□□ -1.57
VRK1-205ENST00000555402 ANKRD28O15084 1053 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 KCNN4O15554 427 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 CCDC175P0C221 793 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 GLULP15104 373 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 DNASE1P24855 282 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 APOBEC1P41238 236 aaKnown RBP5.26□□□□□ -1.57
VRK1-205ENST00000555402 FASLGP48023 281 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 TERF1P54274 439 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 ROR1Q01973 937 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 DDR1Q08345 913 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 DSC1Q08554 894 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 COG2Q14746 738 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 ASIC2Q16515 512 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 ATP13A5Q4VNC0 1218 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 TDRD12Q587J7 1177 aaKnown RBP5.26□□□□□ -1.57
VRK1-205ENST00000555402 EFHC1Q5JVL4 640 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 TMEM211Q6ICI0 200 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 IQCHQ86VS3 1027 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 WFIKKN2Q8TEU8 576 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 ASB5Q8WWX0 329 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 ZNF479Q96JC4 524 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 CSF3RQ99062 836 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 TMEM204Q9BSN7 226 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 MYO6Q9UM54 1294 aa5.26□□□□□ -1.57
VRK1-205ENST00000555402 GOLGA6L9A6NEM1 432 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 IFITM10A6NMD0 228 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 TMEM189-UBE2V1I3L0A0 370 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 J3QR06 171 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 NDUFS4O43181 175 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 PRAMEF11O60813 436 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 KCNJ13O60928 360 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 ZNF217O75362 1048 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 TRUB2O95900 331 aaKnown RBP5.25□□□□□ -1.57
VRK1-205ENST00000555402 NGFRP08138 427 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 QDPRP09417 244 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 UGT1A1P22309 533 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 HRH2P25021 359 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 SSTR2P30874 369 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 MC5RP33032 325 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 PCYT1AP49585 367 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 ZNF41P51814 821 aaPredicted RBP5.25□□□□□ -1.57
VRK1-205ENST00000555402 CDH13P55290 713 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 CD81P60033 236 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 SNRPEP62304 92 aaKnown RBP5.25□□□□□ -1.57
VRK1-205ENST00000555402 PDE1BQ01064 536 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 RALGDSQ12967 914 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 UBE2V1Q13404 147 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 DHX34Q14147 1143 aaKnown RBP5.25□□□□□ -1.57
VRK1-205ENST00000555402 MVPQ14764 893 aaKnown RBP5.25□□□□□ -1.57
VRK1-205ENST00000555402 CBWD6Q4V339 395 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 XKR9Q5GH70 373 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 CBWD3Q5JTY5 395 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 KRBOX4Q5JUW0 171 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 CST9LP1Q5W188 147 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 C18orf63Q68DL7 685 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 CCDC186Q7Z3E2 898 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 GALNTL5Q7Z4T8 443 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 NRROSQ86YC3 692 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 CEP97Q8IW35 865 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 AFAP1Q8N556 730 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 NEXN-AS1Q8NBZ9 246 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 Q8NFD4 153 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 CFAP61Q8NHU2 1237 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 TBC1D16Q8TBP0 767 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 MAGEC3Q8TD91 643 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 ADAMTS14Q8WXS8 1223 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 DNASE2BQ8WZ79 361 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 SIPA1Q96FS4 1042 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 OR1F2PQ96R84 312 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 PPIL3Q9H2H8 161 aaKnown RBP5.25□□□□□ -1.57
VRK1-205ENST00000555402 OPA3Q9H6K4 179 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 MRPL44Q9H9J2 332 aaKnown RBP5.25□□□□□ -1.57
VRK1-205ENST00000555402 PFDN4Q9NQP4 134 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 TRMT1Q9NXH9 659 aaKnown RBP5.25□□□□□ -1.57
VRK1-205ENST00000555402 DDX25Q9UHL0 483 aaKnown RBP5.25□□□□□ -1.57
VRK1-205ENST00000555402 OSGIN1Q9UJX0 560 aa5.25□□□□□ -1.57
VRK1-205ENST00000555402 WBP11Q9Y2W2 641 aaKnown RBP5.25□□□□□ -1.57
VRK1-205ENST00000555402 EDDM13A0A1B0GTR0 161 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 FAM90A26D6RGX4 464 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 GAGE7O76087 117 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 GAGE12FP0CL80 117 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 GAGE12GP0CL81 117 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 GAGE12IP0CL82 117 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 SRCP12931 536 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 PLA2G2AP14555 144 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 PFKFB1P16118 471 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 ERCC2P18074 760 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 NR2F2P24468 414 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 CLDN20P56880 219 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 GAGE1Q13065 139 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 GAGE4Q13068 117 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 TNIP1Q15025 636 aa5.24□□□□□ -1.57
VRK1-205ENST00000555402 SYT16Q17RD7 645 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms