RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CCDC137Q6PK04 289 aaKnown RBP10.45□□□□□ -0.74
SHMT2-215ENST00000554656 XKR5Q6UX68 686 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 CHST15Q7LFX5 561 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-215ENST00000554656 LYSMD3Q7Z3D4 306 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 ARHGAP22Q7Z5H3 698 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 FAM129CQ86XR2 697 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 KLHL7Q8IXQ5 586 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 KCTD6Q8NC69 237 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 RAPGEF5Q92565 580 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 RNF25Q96BH1 459 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-215ENST00000554656 HDAC11Q96DB2 347 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 RTP4Q96DX8 246 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 ARHGAP9Q9BRR9 750 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 APMAPQ9HDC9 416 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 ARFGAP3Q9NP61 516 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 SARS2Q9NP81 518 aaKnown RBP10.45□□□□□ -0.74
SHMT2-215ENST00000554656 FAM114A2Q9NRY5 505 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 SLC39A1Q9NY26 324 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 AMACRQ9UHK6 382 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 ZNHIT2Q9UHR6 403 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 RPL26L1Q9UNX3 145 aaKnown RBP10.45□□□□□ -0.74
SHMT2-215ENST00000554656 DRG1Q9Y295 367 aaKnown RBP10.45□□□□□ -0.74
SHMT2-215ENST00000554656 NBASA2RRP1 2371 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 DOPEY2Q9Y3R5 2298 aa10.45□□□□□ -0.74
SHMT2-215ENST00000554656 A8MU76 341 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 APOC4-APOC2K7ER74 178 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 KCNK1O00180 336 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 NDC80O14777 642 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 DUX1O43812 170 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 RAD1O60671 282 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 ZNF189O75820 626 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-215ENST00000554656 GAS8O95995 478 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 APOC2P02655 101 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 PYGLP06737 847 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 ZFXP17010 805 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-215ENST00000554656 CSTF2P33240 577 aaKnown RBP eCLIP10.44□□□□□ -0.74
SHMT2-215ENST00000554656 CD86P42081 329 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 ATP1A2P50993 1020 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 VSNL1P62760 191 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 DR1Q01658 176 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 KCNC4Q03721 635 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 PEX6Q13608 980 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 GALNT3Q14435 633 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 WDR74Q6RFH5 385 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-215ENST00000554656 TIPARPQ7Z3E1 657 aaKnown RBP10.44□□□□□ -0.74
SHMT2-215ENST00000554656 RAVER1Q8IY67 606 aaKnown RBP10.44□□□□□ -0.74
SHMT2-215ENST00000554656 CACNA2D3Q8IZS8 1091 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 NDUFAF2Q8N183 169 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 PLD5Q8N7P1 536 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 ZSCAN1Q8NBB4 408 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 TRIB3Q96RU7 358 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 SLC38A3Q99624 504 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 CTRCQ99895 268 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 DPYSL5Q9BPU6 564 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 ERP44Q9BS26 406 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 TBC1D10AQ9BXI6 508 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 CEP41Q9BYV8 373 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 FAM117AQ9C073 453 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 GEMIN8Q9NWZ8 242 aaKnown RBP10.44□□□□□ -0.74
SHMT2-215ENST00000554656 OGFRQ9NZT2 677 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 ATXN10Q9UBB4 475 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 PILRAQ9UKJ1 303 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 DNPEPQ9ULA0 475 aa10.44□□□□□ -0.74
SHMT2-215ENST00000554656 UTP11Q9Y3A2 253 aaKnown RBP10.44□□□□□ -0.74
SHMT2-215ENST00000554656 HEMK1Q9Y5R4 338 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-215ENST00000554656 MN1Q10571 1320 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-215ENST00000554656 LOC101059948A0A1B0GTJ6 334 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 TCRBV7S2A1N4TA0A589 114 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 PRR19A6NJB7 356 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 ANKRD66B4E2M5 251 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 ZW10O43264 779 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 SNX2O60749 519 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 JCHAINP01591 159 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 PIRTP0C851 137 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 F3P13726 295 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 ZNF8P17098 575 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-215ENST00000554656 CES1P23141 567 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 PTGIRP43119 386 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 CSRP3P50461 194 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 UBE2IP63279 158 aaKnown RBP10.43□□□□□ -0.74
SHMT2-215ENST00000554656 IFI35P80217 286 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-215ENST00000554656 MC2RQ01718 297 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 PPIDQ08752 370 aaKnown RBP10.43□□□□□ -0.74
SHMT2-215ENST00000554656 KHDC1Q4VXA5 237 aaKnown RBP10.43□□□□□ -0.74
SHMT2-215ENST00000554656 ALS2CLQ60I27 953 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 DUPD1Q68J44 220 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 SLC9A4Q6AI14 798 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 EMBQ6PCB8 327 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 CCDC13Q8IYE1 715 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 UNC5BQ8IZJ1 945 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 IL22RA1Q8N6P7 574 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 GPR26Q8NDV2 337 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 OR10G6Q8NH81 332 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 CCHCR1Q8TD31 782 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 NCSTNQ92542 709 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 COL26A1Q96A83 441 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 TADA1Q96BN2 335 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 RNF31Q96EP0 1072 aa10.43□□□□□ -0.74
SHMT2-215ENST00000554656 AHCYL2Q96HN2 611 aaKnown RBP10.43□□□□□ -0.74
SHMT2-215ENST00000554656 RNF157Q96PX1 679 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms