RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 OR1D5P58170 312 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 GPLD1P80108 840 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 HHEXQ03014 270 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 ZFP36L1Q07352 338 aaKnown RBP12.87□□□□□ -0.35
SHMT2-211ENST00000554310 TMEM115Q12893 351 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-211ENST00000554310 MSLNQ13421 630 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-211ENST00000554310 SPARCL1Q14515 664 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 PLA2G4EQ3MJ16 856 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 IYDQ6PHW0 289 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 LINC00523Q86TU6 105 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 SLC9B2Q86UD5 537 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 TRAPPC5Q8IUR0 188 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 ZNF547Q8IVP9 402 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 MAIP1Q8WWC4 291 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 C1orf54Q8WWF1 131 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 SH3KBP1Q96B97 665 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 ZNF514Q96K75 400 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-211ENST00000554310 PBKQ96KB5 322 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 FOXP3Q9BZS1 431 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 OSGEPL1Q9H4B0 414 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 KCNK4Q9NYG8 393 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 OGFRQ9NZT2 677 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 FKBPLQ9UIM3 349 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 ATXN7L1Q9ULK2 861 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-211ENST00000554310 ZNF148Q9UQR1 794 aa12.87□□□□□ -0.35
SHMT2-211ENST00000554310 IGHV1OR21-1A0A087WYE8 117 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 PLD2O14939 933 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 RRP8O43159 456 aaKnown RBP12.86□□□□□ -0.35
SHMT2-211ENST00000554310 B4GAT1O43505 415 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 LDB2O43679 373 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 DUX1O43812 170 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 UGT1A9O60656 530 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 KCNJ13O60928 360 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 SRP72O76094 671 aaKnown RBP12.86□□□□□ -0.35
SHMT2-211ENST00000554310 IFNB1P01574 187 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 FGGP02679 453 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 RHOXF2BP0C7M4 288 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 UGT1A6P19224 532 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 ITGALP20701 1170 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 UGT1A1P22309 533 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 UGT1A4P22310 534 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 AKT1P31749 480 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 UGT1A3P35503 534 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 UGT1A5P35504 534 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 EPHA4P54764 986 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 NFATC2Q13469 925 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 SQSTM1Q13501 440 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 PTPRCAPQ14761 206 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 CCNG2Q16589 344 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 LONRF2Q1L5Z9 754 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 AMZ1Q400G9 498 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 AGAP9Q5VTM2 703 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 DRICH1Q6PGQ1 229 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-211ENST00000554310 LRRC69Q6ZNQ3 347 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 RAB11FIP2Q7L804 512 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 C11orf96Q7Z7L8 435 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 PIM3Q86V86 326 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 CCDC89Q8N998 374 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 OR10G6Q8NH81 332 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 ZNF398Q8TD17 642 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 ULK4Q96C45 1275 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 SLC46A1Q96NT5 459 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 DCBLD2Q96PD2 775 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 SLC38A3Q99624 504 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 RHOXF2Q9BQY4 288 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 NUDT22Q9BRQ3 303 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-211ENST00000554310 EPB41L1Q9H4G0 881 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 ASB8Q9H765 288 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 UGT1A7Q9HAW7 530 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 UGT1A10Q9HAW8 530 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 UGT1A8Q9HAW9 530 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 RDH14Q9HBH5 336 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 SLC23A2Q9UGH3 650 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 LOXL2Q9Y4K0 774 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 KCTD3Q9Y597 815 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 CFAP47Q6ZTR5 3102 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 ADAMTS20P59510 1910 aa12.86□□□□□ -0.35
SHMT2-211ENST00000554310 KLHL33A6NCF5 533 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 LILRA5A6NI73 299 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 AGAP14A8MT82 685 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 PDZK1P1A8MUH7 402 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 HGSO14964 777 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-211ENST00000554310 SUN1O94901 812 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 MSH3P20585 1137 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 IDSP22304 550 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 CD1CP29017 333 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 CSF2RBP32927 897 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 ABCG1P45844 678 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 UBE2IP63279 158 aaKnown RBP12.85□□□□□ -0.35
SHMT2-211ENST00000554310 XIAPP98170 497 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 DMPKQ09013 629 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 CDH17Q12864 832 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 SEMA5AQ13591 1074 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 TRA2AQ13595 282 aaKnown RBP eCLIP12.85□□□□□ -0.35
SHMT2-211ENST00000554310 SIX1Q15475 284 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-211ENST00000554310 PHF19Q5T6S3 580 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 WASH2PQ6VEQ5 465 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 TMPRSS9Q7Z410 1059 aa12.85□□□□□ -0.35
SHMT2-211ENST00000554310 SNX20Q7Z614 316 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms