RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 GLIS1Q8NBF1 620 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 RSC1A1Q92681 617 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 SGF29Q96ES7 293 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 AHCYL2Q96HN2 611 aaKnown RBP17.92■□□□□ 0.46
SHMT2-206ENST00000553529 TBL1YQ9BQ87 522 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 IMPACTQ9P2X3 320 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 EFR3BQ9Y2G0 817 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 PCDHGA7Q9Y5G6 932 aa17.92■□□□□ 0.46
SHMT2-206ENST00000553529 KMOO15229 486 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 STX7O15400 261 aaKnown RBP17.91■□□□□ 0.46
SHMT2-206ENST00000553529 KIF1CO43896 1103 aaKnown RBP17.91■□□□□ 0.46
SHMT2-206ENST00000553529 POP7O75817 140 aaKnown RBP17.91■□□□□ 0.46
SHMT2-206ENST00000553529 LY6DQ14210 128 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 FNBP1LQ5T0N5 605 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 KCTD11Q693B1 232 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 PDPK2PQ6A1A2 396 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 TMEM71Q6P5X7 295 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 TMEM220Q6QAJ8 160 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 SLC9B2Q86UD5 537 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 BMPERQ8N8U9 685 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 DDHD1Q8NEL9 900 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 OR10G6Q8NH81 332 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 SLC35B2Q8TB61 432 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 DNAJC1Q96KC8 554 aaKnown RBP17.91■□□□□ 0.46
SHMT2-206ENST00000553529 DPH1Q9BZG8 443 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 TRABDQ9H4I3 376 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 RAD18Q9NS91 495 aa17.91■□□□□ 0.46
SHMT2-206ENST00000553529 TEX51A0A1B0GUA7 166 aa17.9■□□□□ 0.46
SHMT2-206ENST00000553529 TMX2-CTNND1H3BSU7 103 aa17.9■□□□□ 0.46
SHMT2-206ENST00000553529 NVLO15381 856 aaKnown RBP17.9■□□□□ 0.46
SHMT2-206ENST00000553529 DUX1O43812 170 aa17.9■□□□□ 0.46
SHMT2-206ENST00000553529 VEGFDO43915 354 aa17.9■□□□□ 0.46
SHMT2-206ENST00000553529 ANXA9O76027 345 aa17.9■□□□□ 0.46
SHMT2-206ENST00000553529 ZNF140P52738 457 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-206ENST00000553529 VAC14Q08AM6 782 aa17.9■□□□□ 0.46
SHMT2-206ENST00000553529 GPR18Q14330 331 aa17.9■□□□□ 0.46
SHMT2-206ENST00000553529 TAF1AQ15573 450 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-206ENST00000553529 BROXQ5VW32 411 aa17.9■□□□□ 0.46
SHMT2-206ENST00000553529 SPDYE1Q8NFV5 336 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-206ENST00000553529 ZNF398Q8TD17 642 aa17.9■□□□□ 0.46
SHMT2-206ENST00000553529 C1orf54Q8WWF1 131 aa17.9■□□□□ 0.46
SHMT2-206ENST00000553529 UBL7Q96S82 380 aaPredicted RBP17.9■□□□□ 0.46
SHMT2-206ENST00000553529 TIMM29Q9BSF4 260 aa17.9■□□□□ 0.46
SHMT2-206ENST00000553529 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.9■□□□□ 0.46
SHMT2-206ENST00000553529 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.9■□□□□ 0.46
SHMT2-206ENST00000553529 HACD3Q9P035 362 aa17.9■□□□□ 0.46
SHMT2-206ENST00000553529 PKP3Q9Y446 797 aa17.9■□□□□ 0.46
SHMT2-206ENST00000553529 OR51F1A6NGY5 319 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 K7ENP7 123 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 ATXN7O15265 892 aaPredicted RBP17.89■□□□□ 0.45
SHMT2-206ENST00000553529 LDB2O43679 373 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 SRP72O76094 671 aaKnown RBP17.89■□□□□ 0.45
SHMT2-206ENST00000553529 LPOP22079 712 aaPredicted RBP17.89■□□□□ 0.45
SHMT2-206ENST00000553529 AKT1P31749 480 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 GRIA1P42261 906 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 CLCNKAP51800 687 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 SH3BP2P78314 561 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 GPLD1P80108 840 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 SQSTM1Q13501 440 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 SNX1Q13596 522 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 INO80CQ6PI98 192 aaPredicted RBP17.89■□□□□ 0.45
SHMT2-206ENST00000553529 CCDC81Q6ZN84 652 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 TMEM26Q6ZUK4 368 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 DTX1Q86Y01 620 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 KLHDC8BQ8IXV7 354 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 UBL4BQ8N7F7 174 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 SLC39A7Q92504 469 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 TTC9Q92623 222 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 TGM7Q96PF1 710 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 ASB8Q9H765 288 aa17.89■□□□□ 0.45
SHMT2-206ENST00000553529 KIR2DS5A0A0G2JLQ3 304 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 A0A0G2JNG1 304 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 C5orf60A6NFR6 353 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 KIR2DS3K7RE56 304 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 HGSO14964 777 aaPredicted RBP17.88■□□□□ 0.45
SHMT2-206ENST00000553529 VIPP01282 170 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 PTMAP06454 111 aaKnown RBP17.88■□□□□ 0.45
SHMT2-206ENST00000553529 ZSCAN5DPP0CG00 497 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 LIPCP11150 499 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 XRCC1P18887 633 aaPredicted RBP17.88■□□□□ 0.45
SHMT2-206ENST00000553529 TNNT3P45378 269 aaPredicted RBP17.88■□□□□ 0.45
SHMT2-206ENST00000553529 SEPHS1P49903 392 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 GTF2H3Q13889 308 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 POU6F1Q14863 301 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 KIR2DS5Q14953 304 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 CCDC38Q502W7 563 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 CERS6Q6ZMG9 384 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 ARHGEF18Q6ZSZ5 1173 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 ARHGAP22Q7Z5H3 698 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 CCNL2Q96S94 520 aaPredicted RBP17.88■□□□□ 0.45
SHMT2-206ENST00000553529 LZTFL1Q9NQ48 299 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 SLC39A1Q9NY26 324 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 PDP2Q9P2J9 529 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 ACSL6Q9UKU0 697 aa17.88■□□□□ 0.45
SHMT2-206ENST00000553529 ATMQ13315 3056 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 MIF4GDA9UHW6 222 aaKnown RBP17.87■□□□□ 0.45
SHMT2-206ENST00000553529 CSTF2P33240 577 aaKnown RBP eCLIP17.87■□□□□ 0.45
SHMT2-206ENST00000553529 MLLT3P42568 568 aaPredicted RBP17.87■□□□□ 0.45
SHMT2-206ENST00000553529 SEPT6Q14141 434 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 PRPSAP1Q14558 356 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms