RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 CLDN6P56747 220 aa18.16■□□□□ 0.5
CPSF2-202ENST00000553427 SESN2P58004 480 aaPredicted RBP18.16■□□□□ 0.5
CPSF2-202ENST00000553427 TARDBPQ13148 414 aaKnown RBP eCLIP18.16■□□□□ 0.5
CPSF2-202ENST00000553427 PTK6Q13882 451 aa18.16■□□□□ 0.5
CPSF2-202ENST00000553427 ITIH4Q14624 930 aa18.16■□□□□ 0.5
CPSF2-202ENST00000553427 ZRANB3Q5FWF4 1079 aa18.16■□□□□ 0.5
CPSF2-202ENST00000553427 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.16■□□□□ 0.5
CPSF2-202ENST00000553427 TMEM220Q6QAJ8 160 aa18.16■□□□□ 0.5
CPSF2-202ENST00000553427 UNQ6494/PRO21346Q6UXR6 183 aa18.16■□□□□ 0.5
CPSF2-202ENST00000553427 SYDE1Q6ZW31 735 aaPredicted RBP18.16■□□□□ 0.5
CPSF2-202ENST00000553427 AMZ2Q86W34 360 aa18.16■□□□□ 0.5
CPSF2-202ENST00000553427 SERPINA9Q86WD7 417 aa18.16■□□□□ 0.5
CPSF2-202ENST00000553427 PIANPQ8IYJ0 282 aa18.16■□□□□ 0.5
CPSF2-202ENST00000553427 C17orf53Q8N3J3 647 aaPredicted RBP18.16■□□□□ 0.5
CPSF2-202ENST00000553427 DCUN1D1Q96GG9 259 aa18.16■□□□□ 0.5
CPSF2-202ENST00000553427 KIFC1Q9BW19 673 aa18.16■□□□□ 0.5
CPSF2-202ENST00000553427 XAB2Q9HCS7 855 aaKnown RBP18.16■□□□□ 0.5
CPSF2-202ENST00000553427 TREX1Q9NSU2 369 aa18.16■□□□□ 0.5
CPSF2-202ENST00000553427 RHPN2P1A8MT19 583 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 D6RAR5 112 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 POP7O75817 140 aaKnown RBP18.15■□□□□ 0.5
CPSF2-202ENST00000553427 TMEM63AO94886 807 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 PRLHRP49683 370 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 SPIDRQ14159 915 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 PPP1R7Q15435 360 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 PLA2G4EQ3MJ16 856 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 LYPLAL1Q5VWZ2 237 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 ANKRD22Q5VYY1 191 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 ABRAXAS1Q6UWZ7 409 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 PACS1Q6VY07 963 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 HDAC10Q969S8 669 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.15■□□□□ 0.5
CPSF2-202ENST00000553427 ZNF778Q96MU6 729 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 LRRN3Q9H3W5 708 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 OSGEPL1Q9H4B0 414 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 FAM96AQ9H5X1 160 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 STN1Q9H668 368 aaKnown RBP18.15■□□□□ 0.5
CPSF2-202ENST00000553427 SLC2A6Q9UGQ3 507 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 FREM2Q5SZK8 3169 aa18.15■□□□□ 0.5
CPSF2-202ENST00000553427 A0A1W2PQM1 296 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 CCDC78A2IDD5 438 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 MGAT4DA6NG13 374 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 OR2AG2A6NM03 316 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 RPLP0P05388 317 aaKnown RBP18.14■□□□□ 0.49
CPSF2-202ENST00000553427 GSTM1P09488 218 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 ATP1B2P14415 290 aaPredicted RBP18.14■□□□□ 0.49
CPSF2-202ENST00000553427 IDSP22304 550 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 PTGIRP43119 386 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 MAGEA3P43357 314 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 CDKN1CP49918 316 aaPredicted RBP18.14■□□□□ 0.49
CPSF2-202ENST00000553427 UBE2IP63279 158 aaKnown RBP18.14■□□□□ 0.49
CPSF2-202ENST00000553427 CCL7P80098 99 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 GSTM4Q03013 218 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 BIRC2Q13490 618 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 SQSTM1Q13501 440 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 DBN1Q16643 649 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 ISXQ2M1V0 245 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 FNBP1LQ5T0N5 605 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 CERS6Q6ZMG9 384 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 SLC9B2Q86UD5 537 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 CAND1Q86VP6 1230 aaKnown RBP18.14■□□□□ 0.49
CPSF2-202ENST00000553427 NAT8LQ8N9F0 302 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 OR2L2Q8NH16 312 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 SH3KBP1Q96B97 665 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 SGF29Q96ES7 293 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 GFM1Q96RP9 751 aaKnown RBP18.14■□□□□ 0.49
CPSF2-202ENST00000553427 NRSN2Q9GZP1 204 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 UCK1Q9HA47 277 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 PRDM8Q9NQV8 689 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 CHRAC1Q9NRG0 131 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 DKK4Q9UBT3 224 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 DNAJC16Q9Y2G8 782 aa18.14■□□□□ 0.49
CPSF2-202ENST00000553427 PPM1DO15297 605 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 SNX2O60749 519 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 CSO75390 466 aaKnown RBP18.13■□□□□ 0.49
CPSF2-202ENST00000553427 AP2A2O94973 939 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 GOT2P00505 430 aaKnown RBP18.13■□□□□ 0.49
CPSF2-202ENST00000553427 PROS1P07225 676 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 BRAFP15056 766 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 XRCC1P18887 633 aaPredicted RBP18.13■□□□□ 0.49
CPSF2-202ENST00000553427 MGAT1P26572 445 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 CASQ1P31415 396 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 NSG1P42857 185 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 PDX1P52945 283 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 PRAMEP78395 509 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 HHEXQ03014 270 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 RTP5Q14D33 572 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 KCTD19Q17RG1 926 aaPredicted RBP18.13■□□□□ 0.49
CPSF2-202ENST00000553427 RNASEH2BQ5TBB1 312 aaKnown RBP18.13■□□□□ 0.49
CPSF2-202ENST00000553427 DET1Q7L5Y6 550 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 TAS2R42Q7RTR8 314 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 MARCH9Q86YJ5 346 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 PPIL6Q8IXY8 311 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 OR4L1Q8NH43 312 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 NXPE2Q96DL1 559 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 CCDC97Q96F63 343 aaPredicted RBP18.13■□□□□ 0.49
CPSF2-202ENST00000553427 SERPINB12Q96P63 405 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 TTC1Q99614 292 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 VPS37BQ9H9H4 285 aa18.13■□□□□ 0.49
CPSF2-202ENST00000553427 SYBUQ9NX95 663 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms