RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 DNASE1P24855 282 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 FLT3P36888 993 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 CA7P43166 264 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 RPL34P49207 117 aaKnown RBP5.09□□□□□ -1.59
CKAP4-203ENST00000553039 ARL4DP49703 201 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 RPS18P62269 152 aaKnown RBP5.09□□□□□ -1.59
CKAP4-203ENST00000553039 PPP2R2BQ00005 443 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 PTSQ03393 145 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 Q0VFX4 171 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 NME3Q13232 169 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 NFATC2Q13469 925 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 IL10RAQ13651 578 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 ZNF169Q14929 603 aaPredicted RBP5.09□□□□□ -1.59
CKAP4-203ENST00000553039 KIR2DS5Q14953 304 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 ACOX1Q15067 660 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 ALFQ53S48 1182 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 LRRC73Q5JTD7 316 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 HP1BP3Q5SSJ5 553 aaPredicted RBP5.09□□□□□ -1.59
CKAP4-203ENST00000553039 CACHD1Q5VU97 1274 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 KCTD16Q68DU8 428 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 FAAH2Q6GMR7 532 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 PWWP2BQ6NUJ5 590 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 PPP4R4Q6NUP7 873 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 UNC13DQ70J99 1090 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 CAMKMTQ7Z624 323 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 ZNF761Q86XN6 746 aaPredicted RBP5.09□□□□□ -1.59
CKAP4-203ENST00000553039 EID3Q8N140 333 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 ZBTB2Q8N680 514 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 PAF1Q8N7H5 531 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 CNTD1Q8N815 330 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 IQUBQ8NA54 791 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 SIDT2Q8NBJ9 832 aaKnown RBP5.09□□□□□ -1.59
CKAP4-203ENST00000553039 ANKRD20A12PQ8NF67 263 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 OR7D4Q8NG98 312 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 OR6K2Q8NGY2 324 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 SLC37A2Q8TED4 501 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 PPP4R1Q8TF05 950 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 ARHGEF2Q92974 986 aaKnown RBP5.09□□□□□ -1.59
CKAP4-203ENST00000553039 ARSGQ96EG1 525 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 SCYL1Q96KG9 808 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 GBP5Q96PP8 586 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 NCAPGQ9BPX3 1015 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 C7orf25Q9BPX7 421 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 SLX1AQ9BQ83 275 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 ZNF559Q9BR84 538 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 TEX101Q9BY14 249 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 LACRTQ9GZZ8 138 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.09□□□□□ -1.59
CKAP4-203ENST00000553039 AKIRIN1Q9H9L7 192 aaPredicted RBP5.09□□□□□ -1.59
CKAP4-203ENST00000553039 UCK1Q9HA47 277 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 SLC39A2Q9NP94 309 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 KCND1Q9NSA2 647 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 CCM2LQ9NUG4 571 aaPredicted RBP5.09□□□□□ -1.59
CKAP4-203ENST00000553039 COX16Q9P0S2 106 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 TNFRSF10DQ9UBN6 386 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 APEX2Q9UBZ4 518 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 CNOT8Q9UFF9 292 aaKnown RBP5.09□□□□□ -1.59
CKAP4-203ENST00000553039 PADI2Q9Y2J8 665 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 PLEKHM1Q9Y4G2 1056 aa5.09□□□□□ -1.59
CKAP4-203ENST00000553039 TNPO3Q9Y5L0 923 aaKnown RBP5.09□□□□□ -1.59
CKAP4-203ENST00000553039 CROCCQ5TZA2 2017 aa5.09□□□□□ -1.6
CKAP4-203ENST00000553039 TACC2O95359 2948 aa5.09□□□□□ -1.6
CKAP4-203ENST00000553039 RNF212BA8MTL3 300 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 M0QYV0 167 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 E2F3O00716 465 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 BUB1O43683 1085 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 PMPCBO75439 489 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 UBXN7O94888 489 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 CRYABP02511 175 aaKnown RBP5.08□□□□□ -1.6
CKAP4-203ENST00000553039 FUCA1P04066 466 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 NR3C1P04150 777 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 HEXAP06865 529 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 ELFN1P0C7U0 828 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 CA5AP35218 305 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 PSMC2P35998 433 aaKnown RBP5.08□□□□□ -1.6
CKAP4-203ENST00000553039 DGKQP52824 942 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 KCNK10P57789 538 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 ADAM8P78325 824 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 KRT85P78386 507 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 ARF5P84085 180 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 PPP3CAQ08209 521 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 MAP4K2Q12851 820 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 CUL2Q13617 745 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 ZNF460Q14592 562 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 PRKD1Q15139 912 aaPredicted RBP5.08□□□□□ -1.6
CKAP4-203ENST00000553039 INO80DQ53TQ3 878 aaPredicted RBP5.08□□□□□ -1.6
CKAP4-203ENST00000553039 BRMS1LQ5PSV4 323 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 C1orf220Q5T0J3 134 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 AGAP7PQ5VUJ5 663 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 LIPIQ6XZB0 460 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 FGD2Q7Z6J4 655 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 TECPR1Q7Z6L1 1165 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 TFAP2DQ7Z6R9 452 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 TMEM110Q86TL2 294 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 TMEM200AQ86VY9 491 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 DEFB106AQ8N104 65 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 ENDOVQ8N8Q3 282 aaKnown RBP5.08□□□□□ -1.6
CKAP4-203ENST00000553039 FAM13CQ8NE31 585 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 ACRBPQ8NEB7 543 aa5.08□□□□□ -1.6
CKAP4-203ENST00000553039 OR2W6PQ8NHA6 318 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms