RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 NME3Q13232 169 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 NCF4Q15080 339 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 AGAP7PQ5VUJ5 663 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 LIPIQ6XZB0 460 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 ZSWIM9Q86XI8 627 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 SIMC1Q8NDZ2 872 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 RSC1A1Q92681 617 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 ZNF514Q96K75 400 aaPredicted RBP8.11□□□□□ -1.11
PRIM1-208ENST00000552590 GDAP1L1Q96MZ0 367 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 AGAP4Q96P64 663 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 IP6K3Q96PC2 410 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 ZSWIM1Q9BR11 485 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 TTYH3Q9C0H2 523 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 DMAC2Q9NW81 257 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 FRRS1LQ9P0K9 344 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 CGNQ9P2M7 1197 aaKnown RBP8.11□□□□□ -1.11
PRIM1-208ENST00000552590 CPNE7Q9UBL6 633 aa8.11□□□□□ -1.11
PRIM1-208ENST00000552590 PRKDCP78527 4128 aaKnown RBP8.1□□□□□ -1.11
PRIM1-208ENST00000552590 NKX2-6A6NCS4 301 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 KRTAP9-7A8MTY7 169 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 I6L893 689 aaPredicted RBP8.1□□□□□ -1.11
PRIM1-208ENST00000552590 SART1O43290 800 aaKnown RBP8.1□□□□□ -1.11
PRIM1-208ENST00000552590 EPB41L2O43491 1005 aaKnown RBP8.1□□□□□ -1.11
PRIM1-208ENST00000552590 SNX2O60749 519 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 ALOX12BO75342 701 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 IGHEP01854 428 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 UGT1A4P22310 534 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 STAT6P42226 847 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 CXCR3P49682 368 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 PPP1CAP62136 330 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 HMGN5P82970 282 aaKnown RBP8.1□□□□□ -1.11
PRIM1-208ENST00000552590 ACY1Q03154 408 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 ACOX1Q15067 660 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 KNOP1Q1ED39 458 aaKnown RBP8.1□□□□□ -1.11
PRIM1-208ENST00000552590 PTCHD3Q3KNS1 767 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 PYCR3Q53H96 274 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 IRGCQ6NXR0 463 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 PODNL1Q6PEZ8 512 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 ZNF783Q6ZMS7 281 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 LINC00696Q6ZRV3 163 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 DRC7Q8IY82 874 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 SLC41A2Q96JW4 573 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 PWWP2AQ96N64 755 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 LRFN5Q96NI6 719 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 GPATCH1Q9BRR8 931 aaKnown RBP8.1□□□□□ -1.11
PRIM1-208ENST00000552590 LLPHQ9BRT6 129 aaKnown RBP8.1□□□□□ -1.11
PRIM1-208ENST00000552590 MRPL18Q9H0U6 180 aaKnown RBP8.1□□□□□ -1.11
PRIM1-208ENST00000552590 CLEC4MQ9H2X3 399 aaPredicted RBP8.1□□□□□ -1.11
PRIM1-208ENST00000552590 EPS8L2Q9H6S3 715 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 ZNF212Q9UDV6 495 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 EDARQ9UNE0 448 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 MFHAS1Q9Y4C4 1052 aa8.1□□□□□ -1.11
PRIM1-208ENST00000552590 TENM1Q9UKZ4 2725 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 TSPAN11A1L157 253 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 CFAP69A5D8W1 941 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 GOLGA6CA6NDK9 693 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 GOLGA6BA6NDN3 693 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 SPRY1O43609 319 aaPredicted RBP8.09□□□□□ -1.11
PRIM1-208ENST00000552590 KLF7O75840 302 aaPredicted RBP8.09□□□□□ -1.11
PRIM1-208ENST00000552590 TMCC1O94876 653 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 RHOBTB3O94955 611 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 ZNF202O95125 648 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 IGSF6O95976 241 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 HOXD4P09016 255 aaPredicted RBP8.09□□□□□ -1.11
PRIM1-208ENST00000552590 GOLGA6DP0CG33 693 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 UNGP13051 313 aaPredicted RBP8.09□□□□□ -1.11
PRIM1-208ENST00000552590 RORAP35398 523 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 FOXL2P58012 376 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 TFF3Q07654 80 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 SSPNQ14714 243 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 GPR19Q15760 415 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 C3P1Q6ZMU1 363 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 Q6ZS46 218 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 TMEM151BQ8IW70 566 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 SYTL1Q8IYJ3 562 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 DEFB106AQ8N104 65 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 TTC30BQ8N4P2 665 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 CLIP3Q96DZ5 547 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 MAGED4Q96JG8 741 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 EXOC2Q96KP1 924 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 NCAPGQ9BPX3 1015 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 TRIM62Q9BVG3 475 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 UCK2Q9BZX2 261 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 KCND1Q9NSA2 647 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 GOLGA6AQ9NYA3 693 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 STMN3Q9NZ72 180 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 ABI3Q9P2A4 366 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 PRKAB1Q9Y478 270 aa8.09□□□□□ -1.11
PRIM1-208ENST00000552590 PCYT1BQ9Y5K3 369 aaPredicted RBP8.09□□□□□ -1.11
PRIM1-208ENST00000552590 MPDZO75970 2070 aa8.08□□□□□ -1.12
PRIM1-208ENST00000552590 FAM90A27PA6NNH2 459 aa8.08□□□□□ -1.12
PRIM1-208ENST00000552590 SOCS6O14544 535 aa8.08□□□□□ -1.12
PRIM1-208ENST00000552590 PHF1O43189 567 aaPredicted RBP8.08□□□□□ -1.12
PRIM1-208ENST00000552590 PRAMEF2O60811 474 aa8.08□□□□□ -1.12
PRIM1-208ENST00000552590 SRGAP2O75044 1071 aa8.08□□□□□ -1.12
PRIM1-208ENST00000552590 GADD45BO75293 160 aaPredicted RBP8.08□□□□□ -1.12
PRIM1-208ENST00000552590 ATE1O95260 518 aa8.08□□□□□ -1.12
PRIM1-208ENST00000552590 PYGMP11217 842 aa8.08□□□□□ -1.12
PRIM1-208ENST00000552590 BRD2P25440 801 aaKnown RBP8.08□□□□□ -1.12
PRIM1-208ENST00000552590 CAPZBP47756 277 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms