RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 SNX2O60749 519 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 KRT14P02533 472 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 IDSP22304 550 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 HHEXQ03014 270 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 ACVR1Q04771 509 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 CACNG1Q06432 222 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 KCNJ11Q14654 390 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 ZRANB3Q5FWF4 1079 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 TSTD2Q5T7W7 516 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 AGAP9Q5VTM2 703 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 TMEM220Q6QAJ8 160 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 ABRAXAS1Q6UWZ7 409 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 SLC9B2Q86UD5 537 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 AMZ2Q86W34 360 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 Q8N9G6 341 aaPredicted RBP15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 PPHLN1Q8NEY8 458 aaKnown RBP15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 GRK7Q8WTQ7 553 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 SH3KBP1Q96B97 665 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 LINC00615Q96LM1 132 aaPredicted RBP15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 IL22Q9GZX6 179 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 ZDHHC3Q9NYG2 299 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 DNAJC16Q9Y2G8 782 aa15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.17■□□□□ 0.02
PRPF40B-211ENST00000551063 IGLV3-16A0A075B6K0 115 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 OR2AG2A6NM03 316 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 ZNF185O15231 689 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 PPM1DO15297 605 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 POP7O75817 140 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 CPNE6O95741 557 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 ACRV1P26436 265 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 CCKBRP32239 447 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 PRLHRP49683 370 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 ARSDP51689 593 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 UBE2IP63279 158 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 GPLD1P80108 840 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 CYP4F3Q08477 520 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 GPS1Q13098 491 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 ITIH4Q14624 930 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 CCDC38Q502W7 563 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 PCID2Q5JVF3 399 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 FNBP1LQ5T0N5 605 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 ARMC3Q5W041 872 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 C19orf48Q6RUI8 117 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 AFTPHQ6ULP2 937 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 OR13J1Q8NGT2 312 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.16■□□□□ 0.023e-6■■■■■ 53.6
PRPF40B-211ENST00000551063 LIN37Q96GY3 246 aaPredicted RBP15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 TMEM74Q96NL1 305 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 PRDM8Q9NQV8 689 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 BFARQ9NZS9 450 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 NEU2Q9Y3R4 380 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 ENTPD2Q9Y5L3 495 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 ZZEF1O43149 2961 aa15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 ZNF106Q9H2Y7 1883 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-211ENST00000551063 APC2O95996 2303 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 CTAGE9A4FU28 777 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 LILRA5A6NI73 299 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 CASC3O15234 703 aaKnown RBP15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 B4GAT1O43505 415 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 XRCC1P18887 633 aaPredicted RBP15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 ALDH4A1P30038 563 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 FOXN2P32314 431 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 NPY2RP49146 381 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 VPS41P49754 854 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 EPHA4P54764 986 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 OR1D5P58170 312 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 SARNPP82979 210 aaKnown RBP15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 EIF3IQ13347 325 aaKnown RBP15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 SQSTM1Q13501 440 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 TRIP13Q15645 432 aaPredicted RBP15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 MAP9Q49MG5 647 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 LRRC8BQ6P9F7 803 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 IGF2-ASQ6U949 168 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 ZNF534Q76KX8 674 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 DET1Q7L5Y6 550 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 SERPINA9Q86WD7 417 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 SGF29Q96ES7 293 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 SGSM3Q96HU1 749 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 SLC38A3Q99624 504 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 DPYSL5Q9BPU6 564 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 STRADBQ9C0K7 418 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 FAM96AQ9H5X1 160 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 UCK1Q9HA47 277 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 MRM3Q9HC36 420 aaKnown RBP15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 POT1Q9NUX5 634 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 KCNK4Q9NYG8 393 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 CPNE7Q9UBL6 633 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 RAXQ9Y2V3 346 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 SAR1BQ9Y6B6 198 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 CACNA1GO43497 2377 aa15.15■□□□□ 0.02
PRPF40B-211ENST00000551063 TRBV23OR9-2A0A075B6M9 112 aa15.14■□□□□ 0.01
PRPF40B-211ENST00000551063 IGHV1OR21-1A0A087WYE8 117 aa15.14■□□□□ 0.01
PRPF40B-211ENST00000551063 CCDC187A0A096LP49 1063 aa15.14■□□□□ 0.01
PRPF40B-211ENST00000551063 CCDC78A2IDD5 438 aa15.14■□□□□ 0.01
PRPF40B-211ENST00000551063 CCDC162PA2VCL2 907 aa15.14■□□□□ 0.01
PRPF40B-211ENST00000551063 MGAT4DA6NG13 374 aa15.14■□□□□ 0.01
PRPF40B-211ENST00000551063 SGTAO43765 313 aa15.14■□□□□ 0.01
PRPF40B-211ENST00000551063 DXOO77932 396 aaKnown RBP15.14■□□□□ 0.01
PRPF40B-211ENST00000551063 AP2A2O94973 939 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms