RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SOS1Q07889 1333 aaPredicted RBP5.37□□□□□ -1.55
CPSF6-206ENST00000550987 OGG1O15527 345 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 PTMAP06454 111 aaKnown RBP5.36□□□□□ -1.55
CPSF6-206ENST00000550987 TACR2P21452 398 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 AVPR1AP37288 418 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 THPOP40225 353 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 CXCR3P49682 368 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 PNLIPRP2P54317 469 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 RAD23AP54725 363 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 CDH12P55289 794 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 ZNF91Q05481 1191 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 CAMK2DQ13557 499 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 NEDD9Q14511 834 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 CDONQ4KMG0 1287 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 SGO1Q5FBB7 561 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 SIGIRRQ6IA17 410 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 SHQ1Q6PI26 577 aaKnown RBP5.36□□□□□ -1.55
CPSF6-206ENST00000550987 IL27RAQ6UWB1 636 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 CFAP77Q6ZQR2 320 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 QSOX2Q6ZRP7 698 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 DENND5BQ6ZUT9 1274 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 LINGO2Q7L985 606 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 CCDC186Q7Z3E2 898 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 DNAJB7Q7Z6W7 309 aaPredicted RBP5.36□□□□□ -1.55
CPSF6-206ENST00000550987 PALB2Q86YC2 1186 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 ARID3BQ8IVW6 561 aaPredicted RBP5.36□□□□□ -1.55
CPSF6-206ENST00000550987 WDR63Q8IWG1 891 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 SLC35F3Q8IY50 421 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 CNPY4Q8N129 248 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 MINDY1Q8N5J2 469 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 EME1Q96AY2 570 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 MSI2Q96DH6 328 aaKnown RBP5.36□□□□□ -1.55
CPSF6-206ENST00000550987 GFM1Q96RP9 751 aaKnown RBP5.36□□□□□ -1.55
CPSF6-206ENST00000550987 FIZ1Q96SL8 496 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 PCGF1Q9BSM1 259 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 KRTAP17-1Q9BYP8 105 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 EDEM3Q9BZQ6 932 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 SPAG4Q9NPE6 437 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 ARGLU1Q9NWB6 273 aaPredicted RBP5.36□□□□□ -1.55
CPSF6-206ENST00000550987 CISD1Q9NZ45 108 aaKnown RBP5.36□□□□□ -1.55
CPSF6-206ENST00000550987 KLHL13Q9P2N7 655 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 COPG2Q9UBF2 871 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 MUTYHQ9UIF7 546 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 AGO2Q9UKV8 859 aaKnown RBP5.36□□□□□ -1.55
CPSF6-206ENST00000550987 PLAGL1Q9UM63 463 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 EXO1Q9UQ84 846 aaKnown RBP5.36□□□□□ -1.55
CPSF6-206ENST00000550987 CCL27Q9Y4X3 112 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 RAI2Q9Y5P3 530 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 RALGAPA2Q2PPJ7 1873 aa5.36□□□□□ -1.55
CPSF6-206ENST00000550987 ASTN2O75129 1339 aaPredicted RBP5.35□□□□□ -1.55
CPSF6-206ENST00000550987 A0A0U1RQF3 1178 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 A8MXE2 369 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 KLK8O60259 260 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 PSMD10O75832 226 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 CCDC175P0C221 793 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 MYZAPP0CAP1 466 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 MMP9P14780 707 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 CPT2P23786 658 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 TNNT3P45378 269 aaPredicted RBP5.35□□□□□ -1.55
CPSF6-206ENST00000550987 TAS2R40P59535 323 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 GRSF1Q12849 480 aaKnown RBP eCLIP5.35□□□□□ -1.55
CPSF6-206ENST00000550987 KLF10Q13118 480 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 GRAPQ13588 217 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 PKP1Q13835 747 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 SNTB1Q13884 538 aaKnown RBP5.35□□□□□ -1.55
CPSF6-206ENST00000550987 KRT33BQ14525 404 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 SMTNL2Q2TAL5 461 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 LETM2Q2VYF4 491 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 HERC4Q5GLZ8 1057 aaPredicted RBP5.35□□□□□ -1.55
CPSF6-206ENST00000550987 ZNF362Q5T0B9 420 aaPredicted RBP5.35□□□□□ -1.55
CPSF6-206ENST00000550987 NUGGCQ68CJ6 796 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 PLPPR4Q7Z2D5 763 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 MRGPRGQ86SM5 289 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 EPHX4Q8IUS5 362 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 CNGA4Q8IV77 575 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 SCYL3Q8IZE3 742 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 SCCPDHQ8NBX0 429 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 KCNH5Q8NCM2 988 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 SEMA6DQ8NFY4 1073 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 SNAPC3Q92966 411 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 IGSF8Q969P0 613 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 SLC41A2Q96JW4 573 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 DGAT2Q96PD7 388 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 RAB3IPQ96QF0 476 aaPredicted RBP5.35□□□□□ -1.55
CPSF6-206ENST00000550987 FAM110AQ9BQ89 295 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 CDK19Q9BWU1 502 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 NPFFR1Q9GZQ6 430 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 OPA3Q9H6K4 179 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 PDGFCQ9NRA1 345 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 THSD1Q9NS62 852 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 CYSLTR2Q9NS75 346 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 WDR35Q9P2L0 1181 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 RASAL2Q9UJF2 1139 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 RCOR1Q9UKL0 485 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 PADI1Q9ULC6 663 aa5.35□□□□□ -1.55
CPSF6-206ENST00000550987 GBF1Q92538 1859 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 RGPD2P0DJD1 1756 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 LRRC37AA6NMS7 1700 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 BRWD1Q9NSI6 2320 aa5.34□□□□□ -1.55
CPSF6-206ENST00000550987 MAP3K19Q56UN5 1328 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms