RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 AGTP01019 485 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 UGT1A6P19224 532 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 IDSP22304 550 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 UGT1A1P22309 533 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 UGT1A4P22310 534 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 RPL10P27635 214 aaKnown RBP13.2□□□□□ -0.3
GCN1-206ENST00000549815 PTPN7P35236 360 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 ADRA1AP35348 466 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 CYLC1P35663 651 aaPredicted RBP13.2□□□□□ -0.3
GCN1-206ENST00000549815 PPM1FP49593 454 aaPredicted RBP13.2□□□□□ -0.3
GCN1-206ENST00000549815 CTSCP53634 463 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 DRG2P55039 364 aaKnown RBP13.2□□□□□ -0.3
GCN1-206ENST00000549815 COPS2P61201 443 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 DMPKQ09013 629 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 MSLNQ13421 630 aaPredicted RBP13.2□□□□□ -0.3
GCN1-206ENST00000549815 CLCA4Q14CN2 919 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 SPA17Q15506 151 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 CHRNA6Q15825 494 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 CEACAM20Q6UY09 585 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 PLXDC1Q8IUK5 500 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 RASGEF1AQ8N9B8 481 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 ZSCAN1Q8NBB4 408 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 DDHD1Q8NEL9 900 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 IPMKQ8NFU5 416 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 BLOC1S5Q8TDH9 187 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 PANX2Q96RD6 677 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 ZPBPQ9BS86 351 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 GBA3Q9H227 469 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 UGT1A7Q9HAW7 530 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 UGT1A10Q9HAW8 530 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 UGT1A8Q9HAW9 530 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 SLC40A1Q9NP59 571 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 SMOXQ9NWM0 555 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.2□□□□□ -0.3
GCN1-206ENST00000549815 KLHL3Q9UH77 587 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 RSPH14Q9UHP6 348 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 EFR3BQ9Y2G0 817 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.2□□□□□ -0.3
GCN1-206ENST00000549815 TMEM184BQ9Y519 407 aaPredicted RBP13.2□□□□□ -0.3
GCN1-206ENST00000549815 EPN1Q9Y6I3 576 aaPredicted RBP13.2□□□□□ -0.3
GCN1-206ENST00000549815 DUSP10Q9Y6W6 482 aa13.2□□□□□ -0.3
GCN1-206ENST00000549815 GLYATL1P3A0A0U1RQE8 302 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 PDZK1P1A8MUH7 402 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 BTNL10A8MVZ5 291 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 TOX3O15405 576 aaPredicted RBP13.19□□□□□ -0.3
GCN1-206ENST00000549815 PJA2O43164 708 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 KCNJ13O60928 360 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 ZIC2O95409 532 aaPredicted RBP13.19□□□□□ -0.3
GCN1-206ENST00000549815 DLGAP3O95886 979 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 TYRP1P17643 537 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 CTNNA2P26232 953 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 LEPRP48357 1165 aaKnown RBP13.19□□□□□ -0.3
GCN1-206ENST00000549815 ZNF75DP51815 510 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 OTUD4Q01804 1114 aaKnown RBP13.19□□□□□ -0.3
GCN1-206ENST00000549815 GTF2H3Q13889 308 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 PTPRCAPQ14761 206 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 GPRC6AQ5T6X5 926 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 FAM151BQ6UXP7 276 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 RANBP10Q6VN20 620 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 FAM83HQ6ZRV2 1179 aaPredicted RBP13.19□□□□□ -0.3
GCN1-206ENST00000549815 GLT6D1Q7Z4J2 308 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 TRAPPC5Q8IUR0 188 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 RBM12BQ8IXT5 1001 aaKnown RBP13.19□□□□□ -0.3
GCN1-206ENST00000549815 IL22RA1Q8N6P7 574 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 ACTL9Q8TC94 416 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 RSC1A1Q92681 617 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 MRFAP1L1Q96HT8 127 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 CALR3Q96L12 384 aaKnown RBP13.19□□□□□ -0.3
GCN1-206ENST00000549815 STARD5Q9NSY2 213 aa13.19□□□□□ -0.3
GCN1-206ENST00000549815 DNMT3AQ9Y6K1 912 aaPredicted RBP13.19□□□□□ -0.3
GCN1-206ENST00000549815 SPENQ96T58 3664 aaKnown RBP13.19□□□□□ -0.3
GCN1-206ENST00000549815 LOC101059948A0A1B0GTJ6 334 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 H7C0C1 242 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 J3QKU1 62 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 CAPN5O15484 640 aaPredicted RBP13.18□□□□□ -0.3
GCN1-206ENST00000549815 PPFIA2O75334 1257 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 POP7O75817 140 aaKnown RBP13.18□□□□□ -0.3
GCN1-206ENST00000549815 FAM87AP0C7U9 286 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 MAP4P27816 1152 aaKnown RBP13.18□□□□□ -0.3
GCN1-206ENST00000549815 CAPZBP47756 277 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 ATP5OP48047 213 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 GEMP55040 296 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 OLIG2Q13516 323 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 ITGA9Q13797 1035 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 GPR18Q14330 331 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 LDLRAP1Q5SW96 308 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 AADACL2Q6P093 401 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 TMEM220Q6QAJ8 160 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 RAD9BQ6WBX8 426 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 PRSS42Q7Z5A4 293 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 TMTC1Q8IUR5 882 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 TRIM48Q8IWZ4 208 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 KLHDC8BQ8IXV7 354 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 NLGN4XQ8N0W4 816 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 LRRC57Q8N9N7 239 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 NLGN4YQ8NFZ3 816 aaPredicted RBP13.18□□□□□ -0.3
GCN1-206ENST00000549815 GPR150Q8NGU9 434 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 GDAP1Q8TB36 358 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 ALG3Q92685 438 aa13.18□□□□□ -0.3
GCN1-206ENST00000549815 SLC45A3Q96JT2 553 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms